Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AP001981.2-201ENST00000603241 418 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AP000254.1-201ENST00000609934 520 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC079298.2-201ENST00000623885 459 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC092451.3-201ENST00000625067 1343 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 OR13C1P-202ENST00000641378 2919 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 RNA5SP500-201ENST00000364486 119 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AL021407.1-201ENST00000404531 386 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 NUDT19P3-201ENST00000404698 555 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AMZ2P2-201ENST00000406819 1057 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 P2RY10P2-201ENST00000416730 913 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC104454.1-201ENST00000421341 1401 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 OR5W1P-201ENST00000423705 938 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 MTND6P12-201ENST00000428247 522 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AL512326.1-201ENST00000443050 721 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC093663.2-201ENST00000484625 313 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC090543.1-201ENST00000492168 485 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC234778.2-201ENST00000566241 354 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AGGF1P4-201ENST00000568249 801 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC027243.2-201ENST00000602530 724 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC105129.3-201ENST00000605455 485 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AL121768.1-201ENST00000613917 2544 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC025016.1-201ENST00000616746 682 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AL359314.1-201ENST00000616913 261 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC127024.6-201ENST00000621598 424 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 AC067852.7-201ENST00000623270 535 ntBASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK5RAP1Q96SZ6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 RNU5B-4P-201ENST00000363508 111 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 RNU5E-4P-201ENST00000364931 120 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL031985.1-201ENST00000392713 418 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 SNORA79B-201ENST00000410557 148 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 CDY17P-201ENST00000414121 1282 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 MTCO3P41-201ENST00000414801 328 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL158050.1-201ENST00000416077 457 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms