Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC023271.1-201ENST00000445936 1090 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 MTND1P33-201ENST00000446251 917 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 MTND1P31-201ENST00000449206 961 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AP006222.1-205ENST00000450734 457 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 RN7SL197P-201ENST00000466981 299 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 OR11I1P-201ENST00000486033 954 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC020699.1-201ENST00000505161 445 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 HPRT1P1-201ENST00000509498 657 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC006499.4-201ENST00000510947 694 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 MTATP6P1-201ENST00000514057 681 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 SNORD46.2-201ENST00000516021 102 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 IGKV3D-34-201ENST00000522638 302 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AL132857.1-201ENST00000555180 708 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 FAM106CP-201ENST00000582212 507 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 SNX6P1-201ENST00000601728 1224 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 RPP40P2-201ENST00000603596 712 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AP002802.2-201ENST00000605877 235 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 uc_338.26-201ENST00000612659 160 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AL139099.4-201ENST00000614802 114 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 RMST_10.1-201ENST00000616309 154 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC092159.4-201ENST00000624944 550 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 OR8G3P-202ENST00000641572 1255 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 PDZK1P1-202ENST00000425209 1350 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC106872.5-201ENST00000508856 1416 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC009962.1-201ENST00000567327 3813 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AL096711.1-201ENST00000404780 554 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 RNU2-17P-201ENST00000410290 190 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 MYL6P5-201ENST00000412707 459 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 OR2AT2P-201ENST00000413438 905 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 NMD3P2-201ENST00000421815 761 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 DEFB130D-201ENST00000426866 237 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 ELOCP11-201ENST00000436690 332 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 ELOCP16-201ENST00000444494 332 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 PPIAP20-201ENST00000449839 135 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 RPL7P61-201ENST00000451721 751 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 RPL12P39-201ENST00000455456 496 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 RPSAP51-201ENST00000497462 645 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC093534.1-201ENST00000504977 132 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC084824.2-201ENST00000548906 345 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC007346.2-201ENST00000564816 892 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 MIR4260-201ENST00000583107 67 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AL158152.1-201ENST00000602652 1435 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 AL450336.1-201ENST00000605180 586 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms