Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 RN7SL435P-201ENST00000584418 282 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC006213.4-201ENST00000616184 634 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL591926.1-201ENST00000620542 217 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC129778.1-202ENST00000623812 261 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL591379.1-207ENST00000635982 261 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 SCN1A-220ENST00000641603 12506 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 HSPA8P17-201ENST00000427029 1382 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC007996.1-201ENST00000620414 2821 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RN7SKP292-201ENST00000365522 317 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 HMGB1P20-201ENST00000402555 677 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 USP9YP19-201ENST00000412165 485 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC073464.3-201ENST00000422564 712 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 MTATP6P11-201ENST00000428071 670 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 MTND4P15-201ENST00000437913 1033 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 SUMO1P1-201ENST00000497904 306 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 NIFKP7-201ENST00000503365 834 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 MTCO1P31-201ENST00000506355 492 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC108120.2-201ENST00000512973 294 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 MRPS16P1-201ENST00000523462 412 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 OR8K2P-201ENST00000524645 927 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 CKS1BP1-201ENST00000555221 240 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC023158.1-201ENST00000561632 1025 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 DPPA2P4-201ENST00000563717 878 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AP000769.2-201ENST00000602344 396 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 OR4H6P-202ENST00000603819 340 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC025574.2-201ENST00000615621 514 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 RN7SL544P-201ENST00000617232 284 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RN7SL763P-201ENST00000620922 284 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC073869.10-201ENST00000642016 354 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 AC104118.1-201ENST00000607625 1589 ntBASIC4.73□□□□□ -1.65
RFT1Q96AA3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.73□□□□□ -1.65
RFT1Q96AA3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFT1Q96AA3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms