Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCAMP4Q969E2 AC245100.2-201ENST00000454544 1679 ntBASIC5.69□□□□□ -1.5
SCAMP4Q969E2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAMP4Q969E2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.69□□□□□ -1.5
SCAMP4Q969E2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SCAMP4Q969E2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 RN7SKP269-201ENST00000365545 319 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 RN7SKP286-201ENST00000410894 299 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 HMGB3P31-201ENST00000413333 595 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 NME1P1-201ENST00000420914 382 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 GTF2IP2-201ENST00000424290 697 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AL391987.1-201ENST00000441025 200 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 HMGB3P6-201ENST00000444896 598 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 PTENP1-201ENST00000447117 1215 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 RPL12P39-201ENST00000455456 496 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC004815.1-201ENST00000484185 331 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC091951.3-201ENST00000504093 246 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC074255.1-201ENST00000511259 501 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC010486.3-201ENST00000511602 785 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 SNORA3.4-201ENST00000515969 96 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 OR4A2P-201ENST00000527276 913 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 MTCO2P15-201ENST00000532655 656 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC023050.2-201ENST00000544968 387 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 HSPE1P2-201ENST00000554777 306 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC010547.6-201ENST00000571789 193 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC091057.2-201ENST00000602594 792 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AL353778.1-201ENST00000603149 408 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 MTND3P19-201ENST00000603825 345 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC011374.2-201ENST00000607135 526 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC096586.1-201ENST00000610267 561 ntBASIC5.68□□□□□ -1.5
SCAMP4Q969E2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCAMP4Q969E2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 MTND4P10-201ENST00000446199 1363 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 RNA5SP46-201ENST00000362370 120 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 RNA5SP435-201ENST00000364044 108 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 RNU4-51P-201ENST00000364206 140 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 SNORD116-8-201ENST00000384365 95 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 RNA5SP178-201ENST00000410380 128 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 RPS7P9-201ENST00000414704 586 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 AC002504.1-201ENST00000438281 691 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 AC005297.1-201ENST00000444765 862 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 AC092685.1-201ENST00000447960 1243 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 RPS23P2-201ENST00000463671 415 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 AC138866.2-201ENST00000508650 584 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 HMGB1P1-201ENST00000522557 636 ntBASIC5.67□□□□□ -1.5
SCAMP4Q969E2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAMP4Q969E2 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms