Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AC026826.3-201ENST00000561747 158 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC4Q92889 ZNF322P1-201ENST00000568013 1209 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC019322.1-201ENST00000571869 389 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 PIGPP4-201ENST00000584447 307 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.49□□□□□ -1.37
ERCC4Q92889 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AL139344.1-201ENST00000605228 195 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.49□□□□□ -1.37
ERCC4Q92889 RMST_10.1-201ENST00000616309 154 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 AC015722.2-201ENST00000622210 551 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ERCC4Q92889 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AC079298.1-201ENST00000625026 1619 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC4Q92889 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL603750.1-201ENST00000624216 1717 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL445523.1-201ENST00000451184 1362 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC4Q92889 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC4Q92889 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC4Q92889 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERCC4Q92889 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 OR5H2-201ENST00000355273 945 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC4Q92889 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL603865.2-201ENST00000401679 213 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 RN7SKP29-201ENST00000410957 272 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 RN7SKP279-201ENST00000411383 298 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 CDY17P-201ENST00000414121 1282 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 HMGB1P49-201ENST00000418882 569 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 OR5M12P-201ENST00000423388 929 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 CDY8P-201ENST00000428380 1279 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 MTND2P40-201ENST00000436718 841 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 CDY20P-201ENST00000447528 1279 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 PTGES3P5-201ENST00000455109 434 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 RN7SL254P-201ENST00000460609 284 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AC117394.1-201ENST00000477323 567 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 RN7SL170P-201ENST00000487098 295 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 RNA5SP340-201ENST00000517132 107 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 FTH1P11-201ENST00000517577 551 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AC079064.1-201ENST00000528365 362 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 MTCO2P15-201ENST00000532655 656 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 DUXAP6-201ENST00000553858 601 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC002519.2-203ENST00000567043 837 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 BMS1P7-201ENST00000602440 1052 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AL035411.2-201ENST00000604022 421 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AC079610.2-201ENST00000604818 690 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AC145423.1-201ENST00000605712 336 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC015712.7-201ENST00000615211 635 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 AC073592.6-201ENST00000624271 415 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 AL158152.1-201ENST00000602652 1435 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
ERCC4Q92889 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC144833.1-201ENST00000567953 4089 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC4Q92889 AC019072.1-201ENST00000604535 1551 ntBASIC6.48□□□□□ -1.37
ERCC4Q92889 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC4Q92889 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ERCC4Q92889 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 SNORA5.1-201ENST00000384275 131 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 SKINT1L-201ENST00000401057 817 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 HMGB1P13-201ENST00000406019 642 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms