Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BEST4Q8NFU0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 CASC19-221ENST00000641309 1382 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC010132.2-201ENST00000295493 1043 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 RNU4-44P-201ENST00000363050 141 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 UBE2V1P15-201ENST00000407776 448 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 MIR1275-201ENST00000408770 80 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC234781.4-201ENST00000419384 244 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC006065.1-201ENST00000422539 802 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 CCRL1P1-201ENST00000449542 1053 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AP006222.1-205ENST00000450734 457 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL356981.1-201ENST00000454879 684 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 EIF2S2P4-201ENST00000461070 984 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC058823.1-201ENST00000485315 474 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 RN7SL423P-201ENST00000486202 304 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 RNA5SP249-201ENST00000516127 99 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 RN7SKP34-201ENST00000516142 244 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 SNORA43.3-201ENST00000517240 103 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 CKS1BP1-201ENST00000555221 240 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC040174.2-201ENST00000602701 465 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC233280.2-201ENST00000603917 1070 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC005252.1-201ENST00000604518 1063 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL162431.4-201ENST00000604674 411 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AC018695.5-201ENST00000605872 315 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 HTR1DP1-201ENST00000616500 888 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BEST4Q8NFU0 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.43□□□□□ -1.7
BEST4Q8NFU0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC107977.1-201ENST00000355745 939 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 SNORA16A-201ENST00000384342 137 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 RNU6-1263P-201ENST00000384601 106 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC004386.1-201ENST00000393214 761 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AL035079.1-201ENST00000405210 287 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 U3.32-201ENST00000408116 212 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 EIF4A1P1-201ENST00000420241 934 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 SRSF1P1-201ENST00000424058 520 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AL161722.2-201ENST00000434731 981 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 ARL5AP3-201ENST00000439327 386 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 RPL7AP61-201ENST00000443410 636 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC073587.1-201ENST00000447093 876 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 RBMY2TP-201ENST00000451162 947 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 CYCSP34-201ENST00000458172 304 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 LARP7P4-201ENST00000481075 878 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC093890.1-201ENST00000502554 540 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC021087.2-201ENST00000504656 1203 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC122718.2-201ENST00000505325 591 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST4Q8NFU0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.42□□□□□ -1.7
BEST4Q8NFU0 AC027308.1-201ENST00000517993 110 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms