Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC007386.1-201ENST00000455212 582 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 OR11I1P-201ENST00000486033 954 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 AC021146.3-201ENST00000511911 260 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 RNA5SP34-201ENST00000516887 130 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 AC012400.1-201ENST00000518452 381 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 HMGB1P40-201ENST00000525121 540 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 BLZF2P-201ENST00000553776 1130 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 IMMP1LP1-201ENST00000605170 488 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 AC004808.2-201ENST00000627965 773 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 MTND5P12-201ENST00000502851 1449 ntBASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC112Q8NEF3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 SNORA74A-201ENST00000364089 198 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AL592291.1-201ENST00000403830 352 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 SLC35E1P1-201ENST00000419313 864 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AL606490.1-201ENST00000452266 765 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 RPL21P6-201ENST00000479171 504 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC004825.1-201ENST00000555068 586 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC015720.2-201ENST00000567709 334 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AP005432.2-201ENST00000608162 586 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC000068.2-201ENST00000608816 460 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 MIR6837-201ENST00000620884 64 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 AC135068.12-201ENST00000637370 931 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 PROS2P-201ENST00000474651 1951 ntBASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC112Q8NEF3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AC108751.5-201ENST00000492880 1336 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 RNA5SP319-201ENST00000362768 119 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 U3.3-201ENST00000362986 216 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 RN7SKP113-201ENST00000363891 295 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 RNU4-34P-201ENST00000410431 124 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 RN7SKP278-201ENST00000410504 342 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 DSTNP5-201ENST00000427921 523 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 RNA5SP373-201ENST00000517271 95 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AC134698.5-201ENST00000519444 336 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 OR10D4P-201ENST00000525892 951 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AC119501.1-201ENST00000603646 475 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 Z95327.2-201ENST00000414579 1873 ntBASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms