Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 H3F3BP2-201ENST00000583907 357 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AL162413.1-201ENST00000603198 110 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AL080274.1-201ENST00000605565 220 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 RNU6-88P-201ENST00000606801 100 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC025162.2-201ENST00000619602 560 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC091544.5-201ENST00000620192 3815 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC139792.3-201ENST00000623525 224 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 EIF3EP2-201ENST00000423042 1814 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NPAS3Q8IXF0 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 UGT2B25P-201ENST00000511504 1586 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 Y_RNA.149-201ENST00000363558 117 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 RN7SKP130-201ENST00000364924 301 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 RN7SKP189-201ENST00000365042 330 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 RNU5E-5P-201ENST00000365379 116 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 MIR621-201ENST00000384919 96 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC026310.1-201ENST00000396004 378 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL109755.1-201ENST00000401791 649 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 OR9R1P-201ENST00000412200 877 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL389915.1-201ENST00000422463 466 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC008267.5-201ENST00000424928 265 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC002486.1-201ENST00000435098 391 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 RPS18P1-201ENST00000447840 458 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 RPS4XP12-201ENST00000461747 709 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 RPL5P12-201ENST00000477071 851 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC096743.1-201ENST00000485172 319 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 RN7SL797P-201ENST00000486314 297 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 SETP14-201ENST00000497538 873 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC079140.5-201ENST00000507882 310 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC026412.2-201ENST00000512270 1075 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC093878.1-201ENST00000515630 432 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC109635.6-201ENST00000525487 1113 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC023310.2-201ENST00000553844 547 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC026458.1-201ENST00000564330 438 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC009597.2-201ENST00000604659 592 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL390877.1-201ENST00000605704 214 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC063962.1-201ENST00000608199 521 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC005962.2-201ENST00000611427 652 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL390240.1-201ENST00000612950 384 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AC138627.2-201ENST00000624202 601 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 AL162377.2-201ENST00000624532 337 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms