Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 MIR217-201ENST00000384817 110 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 MIR614-201ENST00000385082 90 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 RN7SKP236-201ENST00000410635 284 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 NPM1P11-201ENST00000417106 855 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 SETP9-201ENST00000423837 832 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 GAPDHP57-201ENST00000424400 585 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC073069.1-201ENST00000428657 441 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 KRT18P53-201ENST00000431919 117 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 IGLV3-4-201ENST00000432300 244 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AL353706.1-201ENST00000436728 494 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 MTND1P30-201ENST00000441241 901 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 YWHAQP9-201ENST00000445891 512 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 RPS27AP15-201ENST00000447672 466 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AL133244.1-201ENST00000456007 258 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC117394.1-201ENST00000477323 567 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 PPP1R2P6-201ENST00000478565 588 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC108471.1-201ENST00000513977 287 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 OR8Q1P-201ENST00000526467 655 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CARSP1-201ENST00000603171 889 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AL590032.1-201ENST00000604920 252 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC018714.1-201ENST00000605028 208 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC112220.3-201ENST00000605502 502 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC103591.3-201ENST00000608684 209 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC087893.2-201ENST00000623272 255 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC015726.3-201ENST00000624501 418 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 ATE1-AS1-202ENST00000636460 506 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC079776.5-201ENST00000641920 211 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC011416.1-201ENST00000514947 1732 ntBASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LYSMD2Q8IV50 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 ZNF806-201ENST00000438300 1774 ntBASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 AC011447.7-201ENST00000624228 1590 ntBASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
LYSMD2Q8IV50 AC140479.2-201ENST00000421567 3130 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms