Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RANP6-201ENST00000413691 644 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC007742.1-201ENST00000425789 329 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 OR5AW1P-201ENST00000426334 1006 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 IGLV3-4-201ENST00000432300 244 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL590128.1-201ENST00000433407 286 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL022324.2-201ENST00000434827 780 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 MTCYBP45-201ENST00000435243 565 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 ELOCP26-201ENST00000436067 329 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 MTCYBP6-201ENST00000441810 138 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 RPS4XP4-201ENST00000443195 763 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 SULT1D1P-201ENST00000458020 882 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 MTND1P16-201ENST00000465177 898 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 RN7SL390P-201ENST00000470634 284 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC026427.2-201ENST00000506228 536 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC096754.1-201ENST00000508904 818 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 IGHV3-32-201ENST00000519182 355 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AK6P1-201ENST00000540219 478 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 ARL2BPP2-201ENST00000550907 489 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL121821.2-201ENST00000556081 394 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC087477.6-201ENST00000559595 843 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 RPS27AP19-201ENST00000597285 458 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC009220.3-201ENST00000604318 586 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL359704.2-201ENST00000604335 521 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL359535.1-201ENST00000612100 1087 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL445647.2-201ENST00000615170 130 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 MIR6849-201ENST00000618543 69 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC017007.4-201ENST00000503353 1352 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 CASC19-206ENST00000641028 1430 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 ZNF806-201ENST00000438300 1774 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LINC01616-201ENST00000561816 2280 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 Y_RNA.89-201ENST00000363031 102 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 Y_RNA.142-201ENST00000363491 102 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 RNU5F-7P-201ENST00000363696 115 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 RN7SKP189-201ENST00000365042 330 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 TRAV35-201ENST00000390462 330 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 RNA5SP474-201ENST00000391234 90 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 AL136100.1-201ENST00000407696 330 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 RPL23AP39-201ENST00000415533 405 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 AC006509.1-201ENST00000420788 634 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 RNGTTP1-201ENST00000420965 728 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 AC009237.2-201ENST00000421358 284 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 AL672212.1-201ENST00000422246 400 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4DQ86TL0 RPS10P21-201ENST00000430654 475 ntBASIC6.12□□□□□ -1.43
ATG4DQ86TL0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms