Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AL022394.1-201ENST00000606979 292 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AL135999.3-201ENST00000610501 812 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC092106.3-201ENST00000611308 722 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AL121890.3-201ENST00000618494 516 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC010975.3-201ENST00000618727 978 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC073569.3-201ENST00000619055 682 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AL121895.2-201ENST00000619558 447 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AP001005.3-201ENST00000622049 129 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AP002782.1-201ENST00000623107 614 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC078883.4-201ENST00000623218 367 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC011815.3-201ENST00000624194 473 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PTCHD4Q6ZW05 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.34□□□□□ -1.56
PTCHD4Q6ZW05 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
PTCHD4Q6ZW05 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.34□□□□□ -1.56
PTCHD4Q6ZW05 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
PTCHD4Q6ZW05 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
PTCHD4Q6ZW05 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PTCHD4Q6ZW05 AL133268.1-201ENST00000405676 1401 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 RNU6-224P-201ENST00000384055 107 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 SNORD65C-201ENST00000390962 71 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 RN7SKP278-201ENST00000410504 342 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 HMGB1P49-201ENST00000418882 569 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 RPL7AP51-201ENST00000422016 760 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 OR5M12P-201ENST00000423388 929 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC130360.1-201ENST00000425489 1117 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC097499.1-201ENST00000444277 208 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 MED28P3-201ENST00000444288 531 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 RPS23P9-201ENST00000448848 438 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 CALM1P2-201ENST00000452941 448 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC244505.3-201ENST00000454598 187 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 RPL7P32-201ENST00000457119 744 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC023050.1-201ENST00000498198 304 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC118465.1-201ENST00000513820 1271 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC130365.2-201ENST00000525882 1201 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AP001000.1-201ENST00000526843 742 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 OR4A43P-201ENST00000532938 908 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 MT1CP-201ENST00000567054 174 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 RBM22P12-201ENST00000567098 1255 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 MRPS21P8-201ENST00000569196 235 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 TXNP4-201ENST00000575018 310 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC061975.8-201ENST00000587058 721 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC124856.1-201ENST00000600819 896 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 HIRAP1-201ENST00000605318 787 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC011374.2-201ENST00000607135 526 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC100847.1-201ENST00000611316 481 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AL512652.1-201ENST00000619006 500 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 AC144833.1-201ENST00000567953 4089 ntBASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD4Q6ZW05 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms