Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC007568.1-201ENST00000422912 471 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 RPS12P10-201ENST00000427031 377 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC090589.1-201ENST00000473109 362 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 NPM1P41-201ENST00000512920 831 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC008814.1-201ENST00000603797 406 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 SNORA66-201ENST00000384792 133 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 RN7SKP202-201ENST00000410439 330 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 RAB9AP4-201ENST00000415230 609 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 CDY14P-201ENST00000431260 1014 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 CDY12P-201ENST00000440679 1015 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 CDY13P-201ENST00000445813 1015 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 CDY23P-201ENST00000451661 1014 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AGGF1P6-201ENST00000569213 976 ntBASIC4.83□□□□□ -1.64
RIF1Q5UIP0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.83□□□□□ -1.64
RIF1Q5UIP0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AL357515.1-201ENST00000402967 542 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 REG1CP-206ENST00000447469 496 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 RPS17P5-201ENST00000498293 408 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 SOX5P1-201ENST00000524155 1127 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC008739.3-201ENST00000603262 127 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 RNA5SP397-201ENST00000391323 118 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 RPS3AP25-201ENST00000411660 793 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 YME1L1P1-201ENST00000429435 297 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 RPS5P7-201ENST00000456664 608 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 MIR2116-201ENST00000517221 80 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 OR4A17P-201ENST00000526032 904 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC011471.1-201ENST00000585766 187 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 AL359922.2-201ENST00000581788 3017 ntBASIC4.82□□□□□ -1.64
RIF1Q5UIP0 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RIF1Q5UIP0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 UGT2B26P-201ENST00000508672 1613 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 MIR634-201ENST00000385208 97 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms