Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC023347.2-201ENST00000433994 462 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 RPL34P22-201ENST00000468193 318 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 RN7SL861P-201ENST00000473793 285 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC106872.3-201ENST00000495104 446 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC010409.2-201ENST00000505780 478 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC002456.2-201ENST00000509356 380 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 RNA5SP96-201ENST00000516041 107 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 RNU6-416P-201ENST00000516265 103 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AP005902.2-201ENST00000518393 307 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 SERPINA15P-201ENST00000529287 266 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 MIR3167-201ENST00000579623 85 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 NF1P2-201ENST00000556855 2505 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 MAPK10-319ENST00000641459 2542 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 EIF4BP4-201ENST00000441847 1780 ntBASIC8.27□□□□□ -1.08
VARS2Q5ST30 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
VARS2Q5ST30 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.08
VARS2Q5ST30 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC8.27□□□□□ -1.08
VARS2Q5ST30 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
VARS2Q5ST30 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
VARS2Q5ST30 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC078795.1-201ENST00000602342 3143 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 RNU6-996P-201ENST00000365438 107 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 Y_RNA.380-201ENST00000365663 111 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 Y_RNA.482-201ENST00000384377 111 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 Y_RNA.483-201ENST00000384380 101 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 PPIAP9-201ENST00000403866 498 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AL390316.1-201ENST00000406279 553 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 COX6CP15-201ENST00000426313 211 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 SCDP1-201ENST00000455244 1081 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 HNRNPDLP3-201ENST00000456745 380 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 RNU7-66P-201ENST00000459469 62 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 RN7SL388P-201ENST00000498736 339 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 RNU4-29P-201ENST00000515943 174 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 RNA5SP92-201ENST00000516437 110 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 RN7SKP92-201ENST00000517266 244 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC131281.1-201ENST00000522984 164 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AP003072.2-201ENST00000527756 676 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC079600.1-201ENST00000550326 297 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 SETP7-201ENST00000552169 453 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC068831.4-201ENST00000556118 109 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC006967.3-201ENST00000594086 1093 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AL133338.2-201ENST00000604292 736 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms