Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 RPL7P48-201ENST00000461513 746 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 RPS23P2-201ENST00000463671 415 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 DUTP1-201ENST00000493631 470 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 PFN1P8-201ENST00000497012 543 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 CAB39P1-201ENST00000502277 460 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC093890.1-201ENST00000502554 540 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 LSM3P4-201ENST00000502948 309 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 GAPDHP71-201ENST00000511530 1003 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC139365.2-201ENST00000517972 253 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AL356801.1-201ENST00000559320 294 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC106730.2-201ENST00000566641 540 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AL499605.1-201ENST00000604628 403 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC022919.1-201ENST00000624979 626 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AL022322.2-201ENST00000624072 20397 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 PDZK1P1-202ENST00000425209 1350 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 METTL21EP-201ENST00000298105 713 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 RNU6-468P-201ENST00000384003 109 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 RNU6-925P-201ENST00000384629 104 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 U3.28-201ENST00000391249 210 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 RPL22P22-201ENST00000395439 379 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 OR7E156P-201ENST00000400303 464 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 MIR1282-201ENST00000408865 101 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 RN7SKP97-201ENST00000410966 333 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 RNF10P1-201ENST00000418589 369 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC115283.1-201ENST00000427353 400 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 ETF1P3-201ENST00000430422 1160 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 KCTD9P1-201ENST00000430462 1167 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC012512.1-201ENST00000446594 718 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AL122020.1-201ENST00000472287 459 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 RPS17P11-201ENST00000474297 293 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC025458.1-201ENST00000506046 166 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC074255.1-201ENST00000511259 501 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC010374.2-201ENST00000512933 535 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC010476.1-201ENST00000519111 851 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC090888.3-201ENST00000558917 509 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 MIR548Y-201ENST00000582739 110 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AP003117.1-201ENST00000602771 554 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC079315.1-201ENST00000602952 623 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 FAM27E4-201ENST00000605259 342 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 MIR6861-201ENST00000618657 64 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AP003497.2-201ENST00000624220 967 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC093311.1-201ENST00000506586 2021 ntBASIC5.8□□□□□ -1.48
CCDC38Q502W7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 CASC19-261ENST00000641853 1638 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms