Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 EEF1A1P39-201ENST00000440791 250 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC009263.1-201ENST00000441193 1239 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AP000281.1-201ENST00000444036 316 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC022431.1-201ENST00000450941 438 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC091959.2-201ENST00000477363 321 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC004815.1-201ENST00000484185 331 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC090058.1-201ENST00000498788 435 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC093815.1-201ENST00000508637 280 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC074087.1-201ENST00000512059 724 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 TMEM97P2-201ENST00000517841 403 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 MTND4P33-201ENST00000556706 766 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 MIR4776-2-201ENST00000580204 80 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC119501.1-201ENST00000603646 475 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 AC024587.1-201ENST00000505925 2157 ntBASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CCDC144BQ3MJ40 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 RBPJP7-201ENST00000442803 1447 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 RBPJP5-201ENST00000449433 1447 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 RNU1-87P-201ENST00000363727 170 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 MIR513B-201ENST00000385136 84 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 RPL35AP3-201ENST00000414680 288 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 TRGV6-201ENST00000417928 299 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 NPM1P22-201ENST00000427761 952 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 MTCO3P21-201ENST00000430791 643 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 MTCYBP31-201ENST00000438855 1122 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 OTX2P1-201ENST00000450956 354 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 SEPT7P3-201ENST00000455017 621 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 RPL23AP12-201ENST00000467573 473 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 RN7SL269P-201ENST00000467795 305 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AL122020.1-201ENST00000472287 459 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 PPP1R11P1-201ENST00000486095 376 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 snoZ278.1-201ENST00000517059 112 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 NPM1P42-201ENST00000560329 862 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC015802.2-201ENST00000589690 189 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 BNIP3P4-201ENST00000604946 565 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC055764.2-201ENST00000610089 670 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 AC096861.1-201ENST00000616652 240 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 uc_338.9-201ENST00000617424 182 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 U6.48-201ENST00000618523 106 ntBASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC144BQ3MJ40 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms