Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H3AP68431 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H3AP68431 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H3AP68431 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H3AP68431 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HIST1H3AP68431 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H3AP68431 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H3AP68431 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H3AP68431 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.4□□□□□ -1.71
HIST1H3AP68431 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H3AP68431 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H3AP68431 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H3AP68431 NXF4-202ENST00000416098 1465 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 MIR137-201ENST00000385223 102 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H3AP68431 U3.36-201ENST00000408418 213 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 SNORA11.3-201ENST00000408471 128 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 QRSL1P2-201ENST00000418582 964 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC005033.1-201ENST00000428904 813 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AL136455.1-201ENST00000441083 1240 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 IGHV5-78-201ENST00000450948 295 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 AL691482.1-201ENST00000453255 87 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 RN7SL30P-201ENST00000488416 306 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC010350.1-201ENST00000504908 231 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 RFPL4AP5-201ENST00000514977 504 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 RFPL4AP3-201ENST00000515267 345 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 RN7SKP260-201ENST00000516907 149 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC105254.2-201ENST00000603636 436 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 SNORA11.6-201ENST00000619030 128 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 AC006840.1-201ENST00000623069 542 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HIST1H3AP68431 THAP12P4-201ENST00000528321 2266 ntBASIC4.39□□□□□ -1.71
HIST1H3AP68431 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H3AP68431 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H3AP68431 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H3AP68431 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC068446.1-201ENST00000556425 1549 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H3AP68431 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 SNURFL-201ENST00000309296 343 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 MIR223-201ENST00000385204 110 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 OR7E125P-201ENST00000443450 846 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 TCEA1P1-201ENST00000449716 880 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AL591363.1-201ENST00000450091 483 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 RN7SL517P-201ENST00000462240 305 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AP000942.1-201ENST00000463969 747 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 HMGN2P25-201ENST00000486956 268 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 ENPP7P9-201ENST00000514456 627 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 NMNAT1P1-201ENST00000554095 876 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC004825.1-201ENST00000555068 586 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 OR11J2P-201ENST00000555298 907 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC104687.2-201ENST00000604442 342 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC015914.2-201ENST00000618167 288 ntBASIC4.38□□□□□ -1.71
HIST1H3AP68431 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HIST1H3AP68431 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H3AP68431 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms