Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.37□□□□□ -1.87
RPL39P62891 AP001002.1-201ENST00000625148 1513 ntBASIC3.37□□□□□ -1.87
RPL39P62891 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RPL39P62891 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPL39P62891 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPL39P62891 HCFC2P1-201ENST00000392864 1592 ntBASIC3.37□□□□□ -1.87
RPL39P62891 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
RPL39P62891 HSPD1P14-201ENST00000432666 1618 ntBASIC3.37□□□□□ -1.87
RPL39P62891 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPL39P62891 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPL39P62891 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AC007998.4-201ENST00000612496 2533 ntBASIC3.36□□□□□ -1.87
RPL39P62891 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
RPL39P62891 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RPL39P62891 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.36□□□□□ -1.87
RPL39P62891 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 RNU1-94P-201ENST00000362627 173 ntBASIC3.36□□□□□ -1.87
RPL39P62891 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RPL39P62891 AC009804.1-201ENST00000400949 179 ntBASIC3.36□□□□□ -1.87
RPL39P62891 VN1R37P-201ENST00000419096 748 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 IPPKP1-201ENST00000422501 768 ntBASIC3.36□□□□□ -1.87
RPL39P62891 Z74021.1-201ENST00000423610 407 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AC104843.2-201ENST00000427666 297 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 PRPF38AP2-201ENST00000438179 851 ntBASIC3.36□□□□□ -1.87
RPL39P62891 OR7E125P-201ENST00000443450 846 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 AC073587.1-201ENST00000447093 876 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 AC104651.2-201ENST00000447549 528 ntBASIC3.36□□□□□ -1.87
RPL39P62891 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.36□□□□□ -1.87
RPL39P62891 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 STMN1P2-201ENST00000508435 439 ntBASIC3.36□□□□□ -1.87
RPL39P62891 OR51A1P-201ENST00000511110 946 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 RNA5SP473-201ENST00000516402 125 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AC022826.1-201ENST00000519383 805 ntBASIC3.36□□□□□ -1.87
RPL39P62891 NMNAT1P1-201ENST00000554095 876 ntBASIC3.36□□□□□ -1.87
RPL39P62891 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 AC091979.2-201ENST00000607514 214 ntBASIC3.36□□□□□ -1.87
RPL39P62891 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.36□□□□□ -1.87
RPL39P62891 AC015660.5-201ENST00000623238 564 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AC136428.4-201ENST00000634254 1155 ntBASIC3.36□□□□□ -1.87
RPL39P62891 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 SOCS5P3-201ENST00000425115 1576 ntBASIC3.36□□□□□ -1.87
RPL39P62891 AC017104.4-201ENST00000636283 1592 ntBASIC3.36□□□□□ -1.87
RPL39P62891 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RPL39P62891 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.36□□□□□ -1.87
RPL39P62891 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.36□□□□□ -1.87
RPL39P62891 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPL39P62891 LINC01109-201ENST00000603837 3081 ntBASIC3.35□□□□□ -1.87
RPL39P62891 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 MIPEPP2-201ENST00000422560 1819 ntBASIC3.35□□□□□ -1.87
RPL39P62891 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.35□□□□□ -1.87
RPL39P62891 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 RNU1-43P-201ENST00000365052 165 ntBASIC3.35□□□□□ -1.87
RPL39P62891 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.35□□□□□ -1.87
RPL39P62891 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.35□□□□□ -1.87
RPL39P62891 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC3.35□□□□□ -1.87
RPL39P62891 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.35□□□□□ -1.87
RPL39P62891 RPL7L1P9-201ENST00000431298 745 ntBASIC3.35□□□□□ -1.87
RPL39P62891 HMGN1P2-201ENST00000445197 310 ntBASIC3.35□□□□□ -1.87
RPL39P62891 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.35□□□□□ -1.87
RPL39P62891 RPL5P16-201ENST00000471467 790 ntBASIC3.35□□□□□ -1.87
RPL39P62891 RN7SL41P-201ENST00000476144 297 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.35□□□□□ -1.87
RPL39P62891 AC116562.1-201ENST00000485355 781 ntBASIC3.35□□□□□ -1.87
RPL39P62891 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.35□□□□□ -1.87
RPL39P62891 RN7SKP260-201ENST00000516907 149 ntBASIC3.35□□□□□ -1.87
RPL39P62891 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.35□□□□□ -1.87
RPL39P62891 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.35□□□□□ -1.87
RPL39P62891 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.35□□□□□ -1.87
RPL39P62891 OR4A46P-201ENST00000527255 933 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AP002373.2-201ENST00000541631 1060 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.35□□□□□ -1.87
RPL39P62891 AC093249.4-201ENST00000564755 259 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.35□□□□□ -1.87
RPL39P62891 AC015912.2-201ENST00000571053 181 ntBASIC3.35□□□□□ -1.87
RPL39P62891 TVP23CP2-201ENST00000571473 623 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.35□□□□□ -1.87
RPL39P62891 AC209154.1-201ENST00000582156 337 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms