Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 PNRC2P1-201ENST00000423940 420 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AL121776.1-201ENST00000429337 372 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC091390.2-201ENST00000432573 374 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 USP9YP35-201ENST00000435696 412 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 MTCYBP34-201ENST00000439552 670 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC016908.1-201ENST00000442571 1219 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERVFC1P60507 ZNF619P1-201ENST00000446539 752 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC007327.1-201ENST00000447461 264 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AL445665.1-202ENST00000452436 324 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 MTND2P24-201ENST00000453434 806 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 YWHAEP1-201ENST00000453697 763 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 RANP2-201ENST00000456833 229 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 RPL7P32-201ENST00000457119 744 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERVFC1P60507 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.56□□□□□ -1.36
ERVFC1P60507 RPL5P12-201ENST00000477071 851 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC069528.1-202ENST00000482888 637 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AL136038.1-201ENST00000497246 351 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 SUMO1P1-201ENST00000497904 306 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 NPM1P27-201ENST00000502784 830 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AK4P6-201ENST00000505168 528 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC109471.1-201ENST00000511631 612 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC106800.2-201ENST00000514009 1103 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 GTF2IP11-201ENST00000526931 420 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AC079600.1-201ENST00000550326 297 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 RPS3AP4-201ENST00000555161 764 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.56□□□□□ -1.36
ERVFC1P60507 ZNF322P1-201ENST00000568013 1209 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 ISCA1P3-201ENST00000577104 373 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.56□□□□□ -1.36
ERVFC1P60507 AC004067.1-201ENST00000608733 700 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AL352984.2-201ENST00000611153 546 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC026368.1-201ENST00000614934 690 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.56□□□□□ -1.36
ERVFC1P60507 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.56□□□□□ -1.36
ERVFC1P60507 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERVFC1P60507 AL356317.1-201ENST00000396110 1436 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 AC106872.5-201ENST00000508856 1416 ntBASIC6.56□□□□□ -1.36
ERVFC1P60507 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERVFC1P60507 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERVFC1P60507 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERVFC1P60507 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERVFC1P60507 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
ERVFC1P60507 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERVFC1P60507 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERVFC1P60507 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.55□□□□□ -1.36
ERVFC1P60507 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ERVFC1P60507 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ERVFC1P60507 AL078595.2-201ENST00000605309 1780 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ERVFC1P60507 AC024651.2-201ENST00000562480 2098 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ERVFC1P60507 Y_RNA.560-201ENST00000384689 102 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 TRAV35-201ENST00000390462 330 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 HMGB1P10-201ENST00000395823 563 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 VDAC2P1-201ENST00000399358 958 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 MIR1178-201ENST00000408396 91 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 RNU2-17P-201ENST00000410290 190 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 PGBD4P8-201ENST00000412993 562 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.55□□□□□ -1.36
ERVFC1P60507 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.55□□□□□ -1.36
ERVFC1P60507 MTND3P23-201ENST00000431980 347 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.55□□□□□ -1.36
ERVFC1P60507 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.55□□□□□ -1.36
ERVFC1P60507 SUMO2P3-201ENST00000438311 288 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.55□□□□□ -1.36
ERVFC1P60507 TRIM60P16-201ENST00000444048 694 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.55□□□□□ -1.36
ERVFC1P60507 ZNF114P1-201ENST00000453500 292 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.55□□□□□ -1.36
ERVFC1P60507 GTF2IP12-201ENST00000456547 356 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC022336.1-201ENST00000475510 337 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC138853.1-201ENST00000503549 823 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC093281.2-201ENST00000510153 597 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.55□□□□□ -1.36
ERVFC1P60507 IGKV2-19-201ENST00000518132 283 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AP000648.1-201ENST00000529682 397 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.55□□□□□ -1.36
ERVFC1P60507 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.55□□□□□ -1.36
ERVFC1P60507 AL121579.2-201ENST00000555466 590 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.55□□□□□ -1.36
ERVFC1P60507 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ERVFC1P60507 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.55□□□□□ -1.36
ERVFC1P60507 AC096553.1-201ENST00000605169 829 ntBASIC6.55□□□□□ -1.36
ERVFC1P60507 AC019131.2-201ENST00000609071 870 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms