Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.47□□□□□ -1.53
CLRN1P58418 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.47□□□□□ -1.53
CLRN1P58418 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 MIR525-201ENST00000384978 85 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLRN1P58418 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 AL139805.1-201ENST00000407837 289 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 RNA5SP156-201ENST00000410250 110 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 Y_RNA.619-201ENST00000410951 90 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 PAICSP7-201ENST00000419829 962 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 RPS3AP44-201ENST00000425466 790 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 ATP5F1P1-201ENST00000433775 569 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 GTF2IP7-202ENST00000436677 309 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 ARMC4P1-201ENST00000438905 707 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.47□□□□□ -1.53
CLRN1P58418 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.47□□□□□ -1.53
CLRN1P58418 RN7SL552P-201ENST00000462094 276 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC090114.3-201ENST00000479267 829 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AC044810.1-201ENST00000480271 711 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 RPL29P23-201ENST00000486188 442 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 OR7E157P-201ENST00000494376 911 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 RN7SL612P-201ENST00000497704 295 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC124293.1-201ENST00000530034 493 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.47□□□□□ -1.53
CLRN1P58418 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.47□□□□□ -1.53
CLRN1P58418 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.47□□□□□ -1.53
CLRN1P58418 AP001823.1-201ENST00000604056 1003 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 BNIP3P4-201ENST00000604946 565 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AC008555.7-201ENST00000605008 583 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AC245297.2-201ENST00000610119 565 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 FP325313.1-201ENST00000638228 703 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLRN1P58418 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLRN1P58418 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 AL662795.2-201ENST00000624252 3706 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AP003486.1-201ENST00000525716 3994 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 CCT8P1-201ENST00000413611 1657 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 NSRP1P1-201ENST00000444067 1693 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLRN1P58418 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLRN1P58418 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLRN1P58418 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.46□□□□□ -1.53
CLRN1P58418 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLRN1P58418 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.46□□□□□ -1.53
CLRN1P58418 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.46□□□□□ -1.53
CLRN1P58418 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLRN1P58418 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.46□□□□□ -1.53
CLRN1P58418 MTND4P26-201ENST00000415971 1359 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 UGT2B26P-201ENST00000508672 1613 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLRN1P58418 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 RNA5SP375-201ENST00000362975 119 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLRN1P58418 Y_RNA.560-201ENST00000384689 102 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 307.1 ms