Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC099654.3-201ENST00000447087 1546 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
BRCA2P51587 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
BRCA2P51587 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
BRCA2P51587 RLIMP1-201ENST00000339626 1680 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 RN7SKP153-201ENST00000365026 316 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.14□□□□□ -1.59
BRCA2P51587 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.14□□□□□ -1.59
BRCA2P51587 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.14□□□□□ -1.59
BRCA2P51587 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.14□□□□□ -1.59
BRCA2P51587 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 PTMAP5-201ENST00000393073 333 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 NFYAP1-201ENST00000431953 972 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.14□□□□□ -1.59
BRCA2P51587 RNU1-6P-201ENST00000516290 144 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.14□□□□□ -1.59
BRCA2P51587 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.14□□□□□ -1.59
BRCA2P51587 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.14□□□□□ -1.59
BRCA2P51587 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.14□□□□□ -1.59
BRCA2P51587 AP003497.2-201ENST00000624220 967 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 TPT1P2-201ENST00000413105 503 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.14□□□□□ -1.59
BRCA2P51587 AP000827.1-201ENST00000527814 258 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 AC012468.1-201ENST00000604888 430 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 ICE2P1-201ENST00000512800 1849 ntBASIC5.14□□□□□ -1.59
BRCA2P51587 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.14□□□□□ -1.59
BRCA2P51587 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRCA2P51587 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
BRCA2P51587 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.13□□□□□ -1.59
BRCA2P51587 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC5.13□□□□□ -1.59
BRCA2P51587 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC5.13□□□□□ -1.59
BRCA2P51587 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
BRCA2P51587 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
BRCA2P51587 AL136231.1-201ENST00000429407 730 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.13□□□□□ -1.59
BRCA2P51587 AC069061.3-201ENST00000582254 823 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 AP001357.1-201ENST00000586304 1053 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 AP001160.4-201ENST00000596971 382 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 AC108359.1-201ENST00000616451 1211 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 AC140479.6-201ENST00000633535 357 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 AC004158.1-201ENST00000564508 4319 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.13□□□□□ -1.59
BRCA2P51587 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 KRR1P1-201ENST00000419430 803 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 YWHABP1-201ENST00000445359 727 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
BRCA2P51587 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
BRCA2P51587 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 AL390879.1-201ENST00000439143 386 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.13□□□□□ -1.59
BRCA2P51587 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 AC087499.8-201ENST00000578406 226 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 AC091979.2-201ENST00000607514 214 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 MIR6867-201ENST00000610636 67 ntBASIC5.13□□□□□ -1.59
BRCA2P51587 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRCA2P51587 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
BRCA2P51587 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
BRCA2P51587 MIR491-201ENST00000384877 84 ntBASIC5.12□□□□□ -1.59
BRCA2P51587 IGBP1P4-201ENST00000503202 879 ntBASIC5.12□□□□□ -1.59
BRCA2P51587 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.12□□□□□ -1.59
BRCA2P51587 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.12□□□□□ -1.59
BRCA2P51587 PSMB7P1-201ENST00000556349 514 ntBASIC5.12□□□□□ -1.59
BRCA2P51587 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.12□□□□□ -1.59
BRCA2P51587 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
BRCA2P51587 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRCA2P51587 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BRCA2P51587 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.12□□□□□ -1.59
BRCA2P51587 SCAND3P1-201ENST00000439854 1060 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms