Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5□□□□□ -1.61
CXCL12P48061 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5□□□□□ -1.61
CXCL12P48061 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5□□□□□ -1.61
CXCL12P48061 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5□□□□□ -1.61
CXCL12P48061 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 GTF2IP11-201ENST00000526931 420 ntBASIC5□□□□□ -1.61
CXCL12P48061 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5□□□□□ -1.61
CXCL12P48061 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5□□□□□ -1.61
CXCL12P48061 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5□□□□□ -1.61
CXCL12P48061 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5□□□□□ -1.61
CXCL12P48061 AL356218.2-201ENST00000605264 187 ntBASIC5□□□□□ -1.61
CXCL12P48061 MLECP1-201ENST00000615893 709 ntBASIC5□□□□□ -1.61
CXCL12P48061 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5□□□□□ -1.61
CXCL12P48061 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 MTCO1P15-201ENST00000529569 1526 ntBASIC5□□□□□ -1.61
CXCL12P48061 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CXCL12P48061 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CXCL12P48061 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5□□□□□ -1.61
CXCL12P48061 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CXCL12P48061 AL442128.2-201ENST00000620246 1824 ntBASIC5□□□□□ -1.61
CXCL12P48061 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 AC091046.3-201ENST00000631455 1574 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CXCL12P48061 KYNUP3-201ENST00000574386 1341 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CXCL12P48061 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 IGKV7-3-201ENST00000357453 298 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 U3.10-201ENST00000364459 214 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 RNA5SP479-201ENST00000364858 117 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CXCL12P48061 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 AC117434.1-201ENST00000419971 836 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 EIF2S2P2-201ENST00000447161 982 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 RPL23AP56-201ENST00000460778 453 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 AC091153.1-201ENST00000466297 402 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 AC012123.2-201ENST00000485809 248 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.99□□□□□ -1.61
CXCL12P48061 AC020937.1-201ENST00000519677 1013 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.99□□□□□ -1.61
CXCL12P48061 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.99□□□□□ -1.61
CXCL12P48061 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 MIR1254-2-201ENST00000579553 63 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 OOSP1P2-201ENST00000579644 351 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 CR381572.2-201ENST00000624852 397 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CXCL12P48061 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL12P48061 ABCC13-202ENST00000463099 3842 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 CASC19-260ENST00000641828 2001 ntBASIC4.99□□□□□ -1.61
CXCL12P48061 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.99□□□□□ -1.61
CXCL12P48061 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 ZNF652P1-201ENST00000442420 1309 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 AC010300.1-201ENST00000600671 5134 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL12P48061 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 AL590240.1-201ENST00000334118 313 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 SNORA70F-201ENST00000384142 135 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 SNORA70.10-201ENST00000384515 134 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CXCL12P48061 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CXCL12P48061 SEPT7P2-202ENST00000398921 823 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 MIR1193-201ENST00000408109 78 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 AC114755.2-201ENST00000413520 361 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 AC006065.1-201ENST00000422539 802 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 AC012519.1-201ENST00000424588 610 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 RPL23AP1-201ENST00000428990 471 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 OR2B7P-201ENST00000429302 934 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 AC009238.2-201ENST00000431026 355 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.98□□□□□ -1.61
CXCL12P48061 MTND2P28-201ENST00000457540 1044 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.98□□□□□ -1.61
CXCL12P48061 OR52A4P-201ENST00000472867 958 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 RPS12P31-201ENST00000491419 398 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL12P48061 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.98□□□□□ -1.61
CXCL12P48061 AC011453.2-201ENST00000603737 729 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.98□□□□□ -1.61
CXCL12P48061 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.98□□□□□ -1.61
CXCL12P48061 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.98□□□□□ -1.61
CXCL12P48061 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL12P48061 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CXCL12P48061 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms