Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC108359.1-201ENST00000616451 1211 ntBASIC5.36□□□□□ -1.55
BRCC3P46736 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.36□□□□□ -1.55
BRCC3P46736 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRCC3P46736 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.36□□□□□ -1.55
BRCC3P46736 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.36□□□□□ -1.55
BRCC3P46736 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRCC3P46736 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRCC3P46736 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
BRCC3P46736 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRCC3P46736 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 MAPK10-328ENST00000641553 4009 ntBASIC5.35□□□□□ -1.55
BRCC3P46736 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCC3P46736 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 AP001284.1-201ENST00000528393 2118 ntBASIC5.35□□□□□ -1.55
BRCC3P46736 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
BRCC3P46736 SNORA48.4-201ENST00000391089 134 ntBASIC5.35□□□□□ -1.55
BRCC3P46736 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCC3P46736 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.35□□□□□ -1.55
BRCC3P46736 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.35□□□□□ -1.55
BRCC3P46736 AC027369.5-201ENST00000533838 755 ntBASIC5.35□□□□□ -1.55
BRCC3P46736 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.35□□□□□ -1.55
BRCC3P46736 AC010487.1-201ENST00000594408 1172 ntBASIC5.35□□□□□ -1.55
BRCC3P46736 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRCC3P46736 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
BRCC3P46736 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.34□□□□□ -1.55
BRCC3P46736 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
BRCC3P46736 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
BRCC3P46736 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.34□□□□□ -1.55
BRCC3P46736 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.34□□□□□ -1.55
BRCC3P46736 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 ATP5HP3-201ENST00000396994 486 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 AL021331.1-201ENST00000402817 582 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 RPL12P9-201ENST00000412942 488 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 RPL26P29-201ENST00000415623 438 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCC3P46736 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCC3P46736 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 USP9YP9-201ENST00000429406 715 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 AC093414.1-201ENST00000434712 514 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCC3P46736 RPS29P9-201ENST00000440360 171 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCC3P46736 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.34□□□□□ -1.55
BRCC3P46736 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCC3P46736 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCC3P46736 AC005412.2-201ENST00000492004 341 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 RPS26P24-201ENST00000497656 331 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCC3P46736 GAPDHP56-201ENST00000506031 988 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCC3P46736 AC098976.1-201ENST00000513014 541 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.34□□□□□ -1.55
BRCC3P46736 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCC3P46736 BGLT3-201ENST00000564523 994 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 MIR4737-201ENST00000583979 81 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCC3P46736 AL022394.1-201ENST00000606979 292 ntBASIC5.34□□□□□ -1.55
BRCC3P46736 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.34□□□□□ -1.55
BRCC3P46736 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.34□□□□□ -1.55
BRCC3P46736 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
BRCC3P46736 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCC3P46736 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRCC3P46736 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.34□□□□□ -1.55
BRCC3P46736 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
BRCC3P46736 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
BRCC3P46736 SAMMSON-226ENST00000642089 1582 ntBASIC5.33□□□□□ -1.56
BRCC3P46736 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRCC3P46736 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCC3P46736 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRCC3P46736 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms