Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL121878.1-201ENST00000418638 859 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 FAM183DP-201ENST00000421987 399 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 RPS4XP16-201ENST00000427198 791 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AL353662.1-201ENST00000439099 327 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC090804.1-201ENST00000448870 490 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-1P43699 PRPF38AP1-201ENST00000451976 933 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 MTATP6P14-201ENST00000455189 673 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC093166.4-201ENST00000457867 318 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC245028.2-201ENST00000458673 253 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 CYCSP20-201ENST00000473154 315 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 RPL21P47-201ENST00000483696 477 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC023424.1-201ENST00000496058 459 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 RBBP4P1-201ENST00000502424 1276 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 TRAV31-201ENST00000502780 342 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 HMGN1P9-201ENST00000515212 298 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 snoU109.6-201ENST00000516831 118 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 RNU6-334P-201ENST00000517072 102 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 TMEM97P2-201ENST00000517841 403 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AP003355.1-201ENST00000518956 587 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 MTND1P8-201ENST00000571424 950 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 EIF1P5-201ENST00000585002 234 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC009237.13-201ENST00000603193 276 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC005828.7-201ENST00000607331 556 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC090912.3-201ENST00000609775 533 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NKX2-1P43699 uc_338.29-201ENST00000615099 168 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 uc_338.31-201ENST00000615595 186 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC007275.1-201ENST00000621243 671 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 TMEM30CP-203ENST00000637814 1035 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NKX2-1P43699 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC008627.1-201ENST00000517511 1704 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 AC005332.5-201ENST00000591222 2919 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 SAMMSON-213ENST00000641336 1521 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 AL353796.1-201ENST00000561542 3241 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 AF287957.1-201ENST00000607368 1595 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 RSL24D1P1-201ENST00000404972 493 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AL009179.1-201ENST00000406085 265 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 RPS6P23-201ENST00000413224 722 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 EIF4A1P1-201ENST00000420241 934 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 FO393419.3-201ENST00000428741 282 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 MRPL50P1-201ENST00000431951 384 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 RPL12P18-201ENST00000437175 325 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 RPL5P7-201ENST00000444235 813 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AC097499.1-201ENST00000444277 208 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AL096829.2-201ENST00000446582 742 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AL358876.1-201ENST00000453364 1075 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 AC021660.1-201ENST00000465006 554 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms