Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC1A1P43005 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SLC1A1P43005 AP001642.1-201ENST00000624727 2117 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 DDX18P5-201ENST00000534547 1306 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 AP000542.2-201ENST00000623199 6179 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 ZNF733P-202ENST00000444809 1573 ntBASIC5.21□□□□□ -1.58
SLC1A1P43005 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SLC1A1P43005 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SLC1A1P43005 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SLC1A1P43005 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SLC1A1P43005 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.2□□□□□ -1.58
SLC1A1P43005 U3.25-201ENST00000391209 220 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AL359643.1-201ENST00000404109 423 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 MIR1286-201ENST00000408112 78 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 SNORA11.5-201ENST00000408163 128 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 MIR1271-201ENST00000408537 86 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC1A1P43005 AC092647.2-201ENST00000452998 253 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 RNA5SP103-201ENST00000459503 118 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC1A1P43005 AC073358.1-201ENST00000505671 684 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC1A1P43005 TVP23CP2-201ENST00000571473 623 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC1A1P43005 TAS2R6P-201ENST00000605022 826 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AC008115.4-201ENST00000619780 775 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AC015660.5-201ENST00000623238 564 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 AP002505.2-201ENST00000623585 696 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC1A1P43005 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC1A1P43005 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 AC107068.1-201ENST00000563286 4218 ntBASIC5.2□□□□□ -1.58
SLC1A1P43005 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC1A1P43005 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC1A1P43005 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC1A1P43005 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC1A1P43005 CKS1BP6-201ENST00000424932 240 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 NMNAT1P2-201ENST00000435192 860 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.19□□□□□ -1.58
SLC1A1P43005 SCAND3P1-201ENST00000439854 1060 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 AC245047.2-201ENST00000441060 530 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SLC1A1P43005 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC1A1P43005 CYCSP34-201ENST00000458172 304 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC1A1P43005 RN7SL244P-201ENST00000493405 297 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 AC104109.1-201ENST00000498563 436 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 SNRPCP2-201ENST00000504370 475 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 COX6B1P5-201ENST00000509843 249 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 RN7SKP46-201ENST00000515942 234 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 AC026688.1-201ENST00000520639 1168 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC1A1P43005 OR7E128P-201ENST00000532736 1024 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 AC015871.5-202ENST00000623252 701 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SLC1A1P43005 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC1A1P43005 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
SLC1A1P43005 AC009643.2-201ENST00000603543 1448 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 RBPJP2-201ENST00000618187 1444 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 CASC19-206ENST00000641028 1430 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 AL034370.1-201ENST00000397254 1590 ntBASIC5.19□□□□□ -1.58
SLC1A1P43005 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC1A1P43005 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC1A1P43005 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SLC1A1P43005 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC1A1P43005 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC1A1P43005 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC1A1P43005 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC1A1P43005 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC1A1P43005 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC1A1P43005 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SLC1A1P43005 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC1A1P43005 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC1A1P43005 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC1A1P43005 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SLC1A1P43005 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC1A1P43005 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC1A1P43005 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC1A1P43005 AP000580.1-201ENST00000404439 358 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC1A1P43005 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC1A1P43005 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC1A1P43005 EIF4HP2-201ENST00000424380 563 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 AL389925.1-201ENST00000432257 728 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 NPM1P48-201ENST00000436002 853 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC1A1P43005 NDUFA5P8-201ENST00000449019 346 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 RN7SL174P-201ENST00000475578 289 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC1A1P43005 HMGN2P25-201ENST00000486956 268 ntBASIC5.18□□□□□ -1.58
SLC1A1P43005 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms