Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40LGP29965 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40LGP29965 AL499605.1-201ENST00000604628 403 ntBASIC4.56□□□□□ -1.68
CD40LGP29965 AL162431.4-201ENST00000604674 411 ntBASIC4.56□□□□□ -1.68
CD40LGP29965 MIR6809-201ENST00000612189 116 ntBASIC4.56□□□□□ -1.68
CD40LGP29965 MIR6861-201ENST00000618657 64 ntBASIC4.56□□□□□ -1.68
CD40LGP29965 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CD40LGP29965 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40LGP29965 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD40LGP29965 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD40LGP29965 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CD40LGP29965 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CD40LGP29965 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD40LGP29965 OR14L1P-202ENST00000641545 3009 ntBASIC4.56□□□□□ -1.68
CD40LGP29965 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40LGP29965 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.56□□□□□ -1.68
CD40LGP29965 AC090971.4-201ENST00000560291 1800 ntBASIC4.56□□□□□ -1.68
CD40LGP29965 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40LGP29965 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 AC087190.4-201ENST00000574616 8334 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 MTCO1P22-201ENST00000604619 1360 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CD40LGP29965 BRAFP1-201ENST00000445336 2703 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CD40LGP29965 MIR375-201ENST00000362103 64 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 RNA5SP477-201ENST00000362639 119 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CD40LGP29965 MIR1203-201ENST00000408812 85 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 Z93019.1-201ENST00000416450 973 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AL022331.1-201ENST00000429025 477 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40LGP29965 AL138899.2-201ENST00000439139 499 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40LGP29965 AL445665.1-202ENST00000452436 324 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40LGP29965 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40LGP29965 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40LGP29965 NPM1P6-201ENST00000521088 871 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40LGP29965 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.55□□□□□ -1.68
CD40LGP29965 AC006530.1-201ENST00000555980 571 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.55□□□□□ -1.68
CD40LGP29965 AC134669.1-201ENST00000581275 672 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40LGP29965 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40LGP29965 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40LGP29965 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40LGP29965 AL713998.2-201ENST00000604538 1198 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AC026979.4-201ENST00000606555 645 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AL357153.4-201ENST00000620487 1016 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 AL359742.1-201ENST00000622497 540 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 FO681491.1-202ENST00000623392 737 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40LGP29965 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CD40LGP29965 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CD40LGP29965 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
CD40LGP29965 AL672167.1-203ENST00000641299 2975 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD40LGP29965 AC106872.5-201ENST00000508856 1416 ntBASIC4.55□□□□□ -1.68
CD40LGP29965 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.54□□□□□ -1.68
CD40LGP29965 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD40LGP29965 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40LGP29965 ASNSP1-201ENST00000518311 1939 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CD40LGP29965 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
CD40LGP29965 AC017104.4-201ENST00000636283 1592 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40LGP29965 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CD40LGP29965 RNA5SP510-201ENST00000364697 99 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD40LGP29965 AC019155.1-201ENST00000382242 574 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 MIR195-201ENST00000385194 87 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 OR7E101P-201ENST00000400428 513 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 LAP3P1-201ENST00000403648 294 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CD40LGP29965 MTCO1P51-201ENST00000427672 1060 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40LGP29965 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40LGP29965 NDUFS5P5-201ENST00000437256 321 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.54□□□□□ -1.68
CD40LGP29965 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.54□□□□□ -1.68
CD40LGP29965 AP006222.1-205ENST00000450734 457 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 AC243772.1-201ENST00000451620 410 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 RN7SL189P-201ENST00000468631 289 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 RPSAP37-201ENST00000470913 821 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40LGP29965 RPS3AP15-201ENST00000483874 781 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 NENFP3-201ENST00000503735 313 ntBASIC4.54□□□□□ -1.68
CD40LGP29965 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40LGP29965 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40LGP29965 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.54□□□□□ -1.68
CD40LGP29965 AC116553.2-201ENST00000564203 463 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms