Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 OR4K6P-201ENST00000416478 897 ntBASIC7.2□□□□□ -1.26
LIG1P18858 HMGB1P48-201ENST00000446155 598 ntBASIC7.2□□□□□ -1.26
LIG1P18858 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.2□□□□□ -1.26
LIG1P18858 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.2□□□□□ -1.26
LIG1P18858 RN7SL39P-201ENST00000462264 297 ntBASIC7.2□□□□□ -1.26
LIG1P18858 RN7SL836P-201ENST00000476140 296 ntBASIC7.2□□□□□ -1.26
LIG1P18858 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.2□□□□□ -1.26
LIG1P18858 OR9A1P-202ENST00000484361 945 ntBASIC7.2□□□□□ -1.26
LIG1P18858 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.2□□□□□ -1.26
LIG1P18858 AC008945.1-201ENST00000505144 499 ntBASIC7.2□□□□□ -1.26
LIG1P18858 AC106800.3-201ENST00000511389 308 ntBASIC7.2□□□□□ -1.26
LIG1P18858 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.2□□□□□ -1.26
LIG1P18858 AC022447.1-201ENST00000515358 464 ntBASIC7.2□□□□□ -1.26
LIG1P18858 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.2□□□□□ -1.26
LIG1P18858 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.2□□□□□ -1.26
LIG1P18858 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.2□□□□□ -1.26
LIG1P18858 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC7.2□□□□□ -1.26
LIG1P18858 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.2□□□□□ -1.26
LIG1P18858 AC007342.5-201ENST00000571340 2142 ntBASIC7.2□□□□□ -1.26
LIG1P18858 SYPL1P2-201ENST00000582878 727 ntBASIC7.2□□□□□ -1.26
LIG1P18858 MIR4999-201ENST00000585029 91 ntBASIC7.2□□□□□ -1.26
LIG1P18858 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.2□□□□□ -1.26
LIG1P18858 AC063977.7-201ENST00000594454 337 ntBASIC7.2□□□□□ -1.26
LIG1P18858 WBP1LP12-201ENST00000604449 331 ntBASIC7.2□□□□□ -1.26
LIG1P18858 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.2□□□□□ -1.26
LIG1P18858 AF250324.2-201ENST00000608299 610 ntBASIC7.2□□□□□ -1.26
LIG1P18858 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.2□□□□□ -1.26
LIG1P18858 AL589743.6-201ENST00000611025 117 ntBASIC7.2□□□□□ -1.26
LIG1P18858 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.2□□□□□ -1.26
LIG1P18858 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.2□□□□□ -1.26
LIG1P18858 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.2□□□□□ -1.26
LIG1P18858 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
LIG1P18858 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LIG1P18858 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIG1P18858 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
LIG1P18858 HDAC1P2-201ENST00000453661 1398 ntBASIC7.2□□□□□ -1.26
LIG1P18858 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 ZNF833P-201ENST00000424938 1494 ntBASIC7.19□□□□□ -1.26
LIG1P18858 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
LIG1P18858 RNU6-694P-201ENST00000364071 147 ntBASIC7.19□□□□□ -1.26
LIG1P18858 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
LIG1P18858 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 MRPS6P2-201ENST00000381143 370 ntBASIC7.19□□□□□ -1.26
LIG1P18858 SNORA40.2-201ENST00000390847 128 ntBASIC7.19□□□□□ -1.26
LIG1P18858 RNU2-22P-201ENST00000411266 212 ntBASIC7.19□□□□□ -1.26
LIG1P18858 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 OR8G2P-201ENST00000412796 908 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 MTCO2P34-201ENST00000421994 607 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.19□□□□□ -1.26
LIG1P18858 RPSAP32-201ENST00000432681 526 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 AC079922.1-201ENST00000443291 359 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AL592437.1-201ENST00000443781 492 ntBASIC7.19□□□□□ -1.26
LIG1P18858 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.19□□□□□ -1.26
LIG1P18858 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 COX4I1P2-201ENST00000447446 547 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AL050341.1-201ENST00000447743 313 ntBASIC7.19□□□□□ -1.26
LIG1P18858 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.19□□□□□ -1.26
LIG1P18858 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 SEPT7P3-201ENST00000455017 621 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 AC005178.1-201ENST00000508392 440 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AC093815.1-201ENST00000508637 280 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 CDC42P4-201ENST00000510507 563 ntBASIC7.19□□□□□ -1.26
LIG1P18858 OR5H7P-201ENST00000514084 930 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 RN7SKP67-201ENST00000515905 235 ntBASIC7.19□□□□□ -1.26
LIG1P18858 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.19□□□□□ -1.26
LIG1P18858 AC027026.1-201ENST00000532323 742 ntBASIC7.19□□□□□ -1.26
LIG1P18858 OR8G3P-201ENST00000533406 921 ntBASIC7.19□□□□□ -1.26
LIG1P18858 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.19□□□□□ -1.26
LIG1P18858 TPRX1P1-201ENST00000557620 319 ntBASIC7.19□□□□□ -1.26
LIG1P18858 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.19□□□□□ -1.26
LIG1P18858 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.19□□□□□ -1.26
LIG1P18858 AC096553.1-201ENST00000605169 829 ntBASIC7.19□□□□□ -1.26
LIG1P18858 AC016727.1-205ENST00000605437 569 ntBASIC7.19□□□□□ -1.26
LIG1P18858 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.19□□□□□ -1.26
LIG1P18858 AC138749.5-201ENST00000611461 208 ntBASIC7.19□□□□□ -1.26
LIG1P18858 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.19□□□□□ -1.26
LIG1P18858 RMST_5.1-201ENST00000618704 126 ntBASIC7.19□□□□□ -1.26
LIG1P18858 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.19□□□□□ -1.26
LIG1P18858 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
LIG1P18858 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.19□□□□□ -1.26
LIG1P18858 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms