Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HMGN1P8-201ENST00000463578 288 ntBASIC4.74□□□□□ -1.65
NCK1P16333 RPL35AP19-201ENST00000469425 329 ntBASIC4.74□□□□□ -1.65
NCK1P16333 RN7SL170P-201ENST00000487098 295 ntBASIC4.74□□□□□ -1.65
NCK1P16333 RN7SL441P-201ENST00000492388 296 ntBASIC4.74□□□□□ -1.65
NCK1P16333 AC074087.1-201ENST00000512059 724 ntBASIC4.74□□□□□ -1.65
NCK1P16333 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.74□□□□□ -1.65
NCK1P16333 NANOGNBP2-201ENST00000544753 553 ntBASIC4.74□□□□□ -1.65
NCK1P16333 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.74□□□□□ -1.65
NCK1P16333 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 AC018552.1-201ENST00000562099 811 ntBASIC4.74□□□□□ -1.65
NCK1P16333 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.74□□□□□ -1.65
NCK1P16333 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 AC138473.1-201ENST00000605717 526 ntBASIC4.74□□□□□ -1.65
NCK1P16333 AC009779.8-202ENST00000607990 932 ntBASIC4.74□□□□□ -1.65
NCK1P16333 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.74□□□□□ -1.65
NCK1P16333 AL590410.1-201ENST00000617925 333 ntBASIC4.74□□□□□ -1.65
NCK1P16333 AC135068.12-201ENST00000637370 931 ntBASIC4.74□□□□□ -1.65
NCK1P16333 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NCK1P16333 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.74□□□□□ -1.65
NCK1P16333 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.74□□□□□ -1.65
NCK1P16333 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
NCK1P16333 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 AL121950.1-201ENST00000624993 2077 ntBASIC4.74□□□□□ -1.65
NCK1P16333 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NCK1P16333 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.74□□□□□ -1.65
NCK1P16333 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NCK1P16333 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.73□□□□□ -1.65
NCK1P16333 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
NCK1P16333 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 RNA5SP339-201ENST00000390987 122 ntBASIC4.73□□□□□ -1.65
NCK1P16333 SLC20A1P1-201ENST00000413906 956 ntBASIC4.73□□□□□ -1.65
NCK1P16333 TRIM60P17-201ENST00000415181 719 ntBASIC4.73□□□□□ -1.65
NCK1P16333 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 EIF4A1P1-201ENST00000420241 934 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.73□□□□□ -1.65
NCK1P16333 RPL24P2-201ENST00000421023 475 ntBASIC4.73□□□□□ -1.65
NCK1P16333 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 RPS4XP16-201ENST00000427198 791 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AL450023.3-201ENST00000440592 271 ntBASIC4.73□□□□□ -1.65
NCK1P16333 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 NPM1P39-201ENST00000449818 867 ntBASIC4.73□□□□□ -1.65
NCK1P16333 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.73□□□□□ -1.65
NCK1P16333 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.73□□□□□ -1.65
NCK1P16333 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 RPL37P23-201ENST00000492641 294 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.73□□□□□ -1.65
NCK1P16333 BTG4P1-201ENST00000510421 183 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.73□□□□□ -1.65
NCK1P16333 RN7SKP70-201ENST00000516655 271 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 AC084033.1-201ENST00000550830 633 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AL512310.9-201ENST00000553311 948 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.73□□□□□ -1.65
NCK1P16333 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.73□□□□□ -1.65
NCK1P16333 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.73□□□□□ -1.65
NCK1P16333 AC027243.2-201ENST00000602530 724 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC010245.2-201ENST00000606908 1167 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC007620.3-201ENST00000608131 497 ntBASIC4.73□□□□□ -1.65
NCK1P16333 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 AC117490.2-201ENST00000610042 594 ntBASIC4.73□□□□□ -1.65
NCK1P16333 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 AL096712.1-201ENST00000614561 159 ntBASIC4.73□□□□□ -1.65
NCK1P16333 RPSAP73-201ENST00000614820 330 ntBASIC4.73□□□□□ -1.65
NCK1P16333 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
NCK1P16333 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.73□□□□□ -1.65
NCK1P16333 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
NCK1P16333 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NCK1P16333 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NCK1P16333 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
NCK1P16333 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NCK1P16333 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NCK1P16333 AC110792.3-201ENST00000595906 1614 ntBASIC4.72□□□□□ -1.65
NCK1P16333 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.72□□□□□ -1.65
NCK1P16333 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.72□□□□□ -1.65
NCK1P16333 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NCK1P16333 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NCK1P16333 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms