Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC093840.1-201ENST00000511599 336 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 AC007016.1-201ENST00000512110 244 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC8.39□□□□□ -1.07
TOP2AP11388 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC8.39□□□□□ -1.07
TOP2AP11388 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOP2AP11388 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
TOP2AP11388 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TOP2AP11388 AC107068.1-201ENST00000563286 4218 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.39□□□□□ -1.07
TOP2AP11388 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TOP2AP11388 AC093829.1-201ENST00000506662 1618 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOP2AP11388 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TOP2AP11388 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOP2AP11388 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC8.39□□□□□ -1.07
TOP2AP11388 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TOP2AP11388 RAD23BP1-201ENST00000421404 1227 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 AC015795.1-201ENST00000513669 327 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 HNRNPRP2-201ENST00000528421 743 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.39□□□□□ -1.07
TOP2AP11388 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.39□□□□□ -1.07
TOP2AP11388 AC093249.4-201ENST00000564755 259 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 AC092653.1-201ENST00000608509 531 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 FTO-223ENST00000640179 210 ntTSL 5 BASIC8.39□□□□□ -1.07
TOP2AP11388 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC8.38□□□□□ -1.07
TOP2AP11388 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TOP2AP11388 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TOP2AP11388 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
TOP2AP11388 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOP2AP11388 AC120338.1-201ENST00000625074 1541 ntBASIC8.38□□□□□ -1.07
TOP2AP11388 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOP2AP11388 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.38□□□□□ -1.07
TOP2AP11388 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC8.38□□□□□ -1.07
TOP2AP11388 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC8.38□□□□□ -1.07
TOP2AP11388 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOP2AP11388 QRSL1P2-201ENST00000418582 964 ntBASIC8.38□□□□□ -1.07
TOP2AP11388 RPL7P57-201ENST00000423238 740 ntBASIC8.38□□□□□ -1.07
TOP2AP11388 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.38□□□□□ -1.07
TOP2AP11388 RPL23AP24-201ENST00000458203 385 ntBASIC8.38□□□□□ -1.07
TOP2AP11388 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC8.38□□□□□ -1.07
TOP2AP11388 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC8.38□□□□□ -1.07
TOP2AP11388 AC243960.7-201ENST00000623532 707 ntBASIC8.38□□□□□ -1.07
TOP2AP11388 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TOP2AP11388 AC108751.5-201ENST00000492880 1336 ntBASIC8.38□□□□□ -1.07
TOP2AP11388 SALL4P2-201ENST00000423288 2910 ntBASIC8.37□□□□□ -1.07
TOP2AP11388 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TOP2AP11388 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.37□□□□□ -1.07
TOP2AP11388 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TOP2AP11388 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TOP2AP11388 CASC19-260ENST00000641828 2001 ntBASIC8.37□□□□□ -1.07
TOP2AP11388 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
TOP2AP11388 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TOP2AP11388 ST13P16-201ENST00000401760 781 ntBASIC8.37□□□□□ -1.07
TOP2AP11388 AL591848.1-201ENST00000413092 322 ntBASIC8.37□□□□□ -1.07
TOP2AP11388 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.37□□□□□ -1.07
TOP2AP11388 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC8.37□□□□□ -1.07
TOP2AP11388 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC8.37□□□□□ -1.07
TOP2AP11388 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
TOP2AP11388 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.37□□□□□ -1.07
TOP2AP11388 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.37□□□□□ -1.07
TOP2AP11388 PYM1-205ENST00000547925 499 ntTSL 3 BASIC8.37□□□□□ -1.07
TOP2AP11388 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC8.37□□□□□ -1.07
TOP2AP11388 AC021483.2-201ENST00000567415 758 ntBASIC8.37□□□□□ -1.07
TOP2AP11388 U3.53-201ENST00000628922 216 ntBASIC8.37□□□□□ -1.07
TOP2AP11388 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TOP2AP11388 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TOP2AP11388 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC8.37□□□□□ -1.07
TOP2AP11388 AC011447.7-201ENST00000624228 1590 ntBASIC8.37□□□□□ -1.07
TOP2AP11388 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
TOP2AP11388 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TOP2AP11388 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TOP2AP11388 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TOP2AP11388 ALB-202ENST00000401494 1659 ntTSL 5 BASIC8.36□□□□□ -1.07
TOP2AP11388 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TOP2AP11388 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.36□□□□□ -1.07
TOP2AP11388 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.36□□□□□ -1.07
TOP2AP11388 GAS5-208ENST00000425771 242 ntTSL 3 BASIC8.36□□□□□ -1.07
TOP2AP11388 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.36□□□□□ -1.07
TOP2AP11388 SNORA70.11-201ENST00000515987 138 ntBASIC8.36□□□□□ -1.07
TOP2AP11388 SNORA70.13-201ENST00000516116 138 ntBASIC8.36□□□□□ -1.07
TOP2AP11388 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.36□□□□□ -1.07
TOP2AP11388 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC8.36□□□□□ -1.07
TOP2AP11388 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.36□□□□□ -1.07
TOP2AP11388 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.36□□□□□ -1.07
TOP2AP11388 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.36□□□□□ -1.07
TOP2AP11388 NLN-202ENST00000502464 8354 ntTSL 5 BASIC8.36□□□□□ -1.07
TOP2AP11388 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TOP2AP11388 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TOP2AP11388 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
TOP2AP11388 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TOP2AP11388 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TOP2AP11388 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TOP2AP11388 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC8.35□□□□□ -1.07
TOP2AP11388 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TOP2AP11388 OR6C69P-201ENST00000394268 893 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 AL354868.1-201ENST00000417077 482 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 KCTD10P1-201ENST00000434203 625 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC8.35□□□□□ -1.07
TOP2AP11388 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.35□□□□□ -1.07
TOP2AP11388 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms