Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGB1P09429 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.88□□□□□ -1.31
HMGB1P09429 MIR4260-201ENST00000583107 67 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGB1P09429 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.88□□□□□ -1.31
HMGB1P09429 MTATP6P2-201ENST00000603319 678 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
HMGB1P09429 AC129778.1-202ENST00000623812 261 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 AC073593.1-201ENST00000624500 411 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 AC103703.1-201ENST00000634783 663 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 AL591379.1-207ENST00000635982 261 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGB1P09429 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
HMGB1P09429 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
HMGB1P09429 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGB1P09429 AP004607.3-201ENST00000530354 3915 ntBASIC6.88□□□□□ -1.31
HMGB1P09429 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
HMGB1P09429 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HMGB1P09429 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGB1P09429 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 AL132640.2-201ENST00000559968 1698 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HMGB1P09429 AL359955.1-201ENST00000455242 3275 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 RNA5SP91-201ENST00000390902 119 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
HMGB1P09429 RN7SKP29-201ENST00000410957 272 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGB1P09429 AL354890.1-201ENST00000413730 346 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 UBE2V1P6-201ENST00000430840 422 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HMGB1P09429 YWHAEP5-201ENST00000431545 765 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGB1P09429 AP000949.1-201ENST00000438328 629 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGB1P09429 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.87□□□□□ -1.31
HMGB1P09429 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGB1P09429 Z83838.1-202ENST00000456225 839 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AP000942.1-201ENST00000463969 747 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.87□□□□□ -1.31
HMGB1P09429 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 OR5H4P-201ENST00000510851 923 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AC074255.1-201ENST00000511259 501 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AP000648.1-201ENST00000529682 397 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGB1P09429 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
HMGB1P09429 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGB1P09429 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGB1P09429 BNIP3P19-201ENST00000605397 577 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 AL031601.1-201ENST00000605702 394 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 MIR6780B-201ENST00000610307 79 ntBASIC6.87□□□□□ -1.31
HMGB1P09429 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGB1P09429 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGB1P09429 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGB1P09429 AC006210.2-201ENST00000367074 1545 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HMGB1P09429 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
HMGB1P09429 RNU1-87P-201ENST00000363727 170 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGB1P09429 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGB1P09429 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.86□□□□□ -1.31
HMGB1P09429 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 AC023347.2-201ENST00000433994 462 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AC006994.1-201ENST00000438212 839 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 RPS26P30-201ENST00000443431 335 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGB1P09429 MEMO1P4-201ENST00000453590 386 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 RN7SL168P-201ENST00000463821 279 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 RN7SL649P-201ENST00000496974 275 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AC025458.1-201ENST00000506046 166 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGB1P09429 MTND2P7-201ENST00000521337 640 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGB1P09429 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGB1P09429 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGB1P09429 AC095057.3-201ENST00000567102 1157 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AC009962.1-201ENST00000567327 3813 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms