Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC4P09017 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC4P09017 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC4P09017 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC4P09017 AL035419.1-201ENST00000397037 564 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 AC002524.1-201ENST00000411687 547 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 AC007559.1-201ENST00000428736 355 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC4P09017 snoU13.20-201ENST00000459180 104 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 AC091180.1-201ENST00000462104 372 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC4P09017 RPSAP51-201ENST00000497462 645 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 SUMO2P4-201ENST00000504193 276 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 CDH12P4-201ENST00000517835 295 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 CDH12P3-201ENST00000517935 295 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 CDH12P1-201ENST00000518435 295 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXC4P09017 AC021006.3-201ENST00000530771 192 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 MIR4480-201ENST00000582492 71 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXC4P09017 AC005377.1-201ENST00000605126 456 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC4P09017 FAM25E-202ENST00000608562 189 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 CR381572.2-201ENST00000624852 397 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC4P09017 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC4P09017 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HOXC4P09017 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC4P09017 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
HOXC4P09017 AP001029.2-203ENST00000589795 4910 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC4P09017 SDAD1P1-202ENST00000524156 2051 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC4P09017 AC022417.1-201ENST00000624768 1303 ntBASIC4.95□□□□□ -1.62
HOXC4P09017 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC4P09017 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXC4P09017 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXC4P09017 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
HOXC4P09017 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXC4P09017 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC4P09017 HMGB3P7-201ENST00000400214 611 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 COX5BP7-201ENST00000414780 274 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 USP9YP9-201ENST00000429406 715 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC4P09017 AC112498.1-201ENST00000444401 332 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC4P09017 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXC4P09017 OR52E3P-201ENST00000452083 936 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC4P09017 HMGB1P4-201ENST00000455362 567 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC4P09017 AC114982.2-201ENST00000461396 358 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC4P09017 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC4P09017 BTF3P13-201ENST00000513224 490 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC4P09017 EIF4A2P5-201ENST00000529914 499 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC4P09017 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC4P09017 AC009117.1-201ENST00000563948 554 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 MIR4700-201ENST00000578311 74 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 MIR4737-201ENST00000583979 81 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXC4P09017 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
HOXC4P09017 AC091932.2-201ENST00000623014 291 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
HOXC4P09017 SOCS5P3-201ENST00000425115 1576 ntBASIC4.94□□□□□ -1.62
HOXC4P09017 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXC4P09017 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC4P09017 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC4P09017 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXC4P09017 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC4P09017 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC4P09017 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC4P09017 RN7SKP103-201ENST00000363848 320 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXC4P09017 AL035079.1-201ENST00000405210 287 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC4P09017 SETP15-201ENST00000412724 337 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AF186996.5-201ENST00000418098 904 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC4P09017 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 AL450023.3-201ENST00000440592 271 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 RPL5P22-201ENST00000480199 884 ntBASIC4.93□□□□□ -1.62
HOXC4P09017 RN7SL591P-201ENST00000496150 292 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms