Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL359715.3-201ENST00000569267 2123 ntBASIC5.3□□□□□ -1.56
RETP07949 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.3□□□□□ -1.56
RETP07949 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RETP07949 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RETP07949 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
RETP07949 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RETP07949 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RETP07949 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RETP07949 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 AC104964.3-201ENST00000606115 2860 ntBASIC5.29□□□□□ -1.56
RETP07949 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RETP07949 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 SDAD1P1-202ENST00000524156 2051 ntBASIC5.29□□□□□ -1.56
RETP07949 AC079741.1-201ENST00000321498 212 ntBASIC5.29□□□□□ -1.56
RETP07949 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 MIR600-201ENST00000385007 98 ntBASIC5.29□□□□□ -1.56
RETP07949 TRAV35-201ENST00000390462 330 ntBASIC5.29□□□□□ -1.56
RETP07949 HYALP1-201ENST00000417674 1279 ntBASIC5.29□□□□□ -1.56
RETP07949 AC092570.3-201ENST00000420113 693 ntBASIC5.29□□□□□ -1.56
RETP07949 DDX39BP1-205ENST00000422507 192 ntBASIC5.29□□□□□ -1.56
RETP07949 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.29□□□□□ -1.56
RETP07949 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.29□□□□□ -1.56
RETP07949 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.29□□□□□ -1.56
RETP07949 AC234781.3-201ENST00000452540 973 ntBASIC5.29□□□□□ -1.56
RETP07949 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.29□□□□□ -1.56
RETP07949 RNU6-964P-201ENST00000516524 69 ntBASIC5.29□□□□□ -1.56
RETP07949 RNA5SP373-201ENST00000517271 95 ntBASIC5.29□□□□□ -1.56
RETP07949 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.29□□□□□ -1.56
RETP07949 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.29□□□□□ -1.56
RETP07949 AC021006.3-201ENST00000530771 192 ntBASIC5.29□□□□□ -1.56
RETP07949 AP006289.1-201ENST00000538089 277 ntBASIC5.29□□□□□ -1.56
RETP07949 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.29□□□□□ -1.56
RETP07949 AL110118.1-201ENST00000553543 400 ntBASIC5.29□□□□□ -1.56
RETP07949 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.29□□□□□ -1.56
RETP07949 AC009237.13-201ENST00000603193 276 ntBASIC5.29□□□□□ -1.56
RETP07949 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.29□□□□□ -1.56
RETP07949 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.29□□□□□ -1.56
RETP07949 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.29□□□□□ -1.56
RETP07949 MFSD8-216ENST00000641147 4009 ntBASIC5.29□□□□□ -1.56
RETP07949 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RETP07949 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.29□□□□□ -1.56
RETP07949 PCAT14-202ENST00000627127 3935 ntBASIC5.29□□□□□ -1.56
RETP07949 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 AC083843.2-201ENST00000568248 6253 ntBASIC5.28□□□□□ -1.56
RETP07949 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.28□□□□□ -1.56
RETP07949 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.28□□□□□ -1.56
RETP07949 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RETP07949 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RETP07949 AC126755.2-208ENST00000327792 462 ntBASIC5.28□□□□□ -1.56
RETP07949 AC138969.1-213ENST00000331436 462 ntBASIC5.28□□□□□ -1.56
RETP07949 RPL32P3-201ENST00000359025 275 ntBASIC5.28□□□□□ -1.56
RETP07949 MIR105-1-201ENST00000385222 81 ntBASIC5.28□□□□□ -1.56
RETP07949 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.28□□□□□ -1.56
RETP07949 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.28□□□□□ -1.56
RETP07949 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.28□□□□□ -1.56
RETP07949 IGBP1P3-201ENST00000447449 1000 ntBASIC5.28□□□□□ -1.56
RETP07949 AC073264.2-201ENST00000448886 166 ntBASIC5.28□□□□□ -1.56
RETP07949 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RETP07949 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.28□□□□□ -1.56
RETP07949 AC021106.1-201ENST00000509020 1058 ntBASIC5.28□□□□□ -1.56
RETP07949 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 AC091912.1-201ENST00000511351 248 ntBASIC5.28□□□□□ -1.56
RETP07949 AC021193.1-201ENST00000511607 420 ntBASIC5.28□□□□□ -1.56
RETP07949 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
RETP07949 OR7H2P-201ENST00000513483 306 ntBASIC5.28□□□□□ -1.56
RETP07949 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.28□□□□□ -1.56
RETP07949 OR5AM1P-201ENST00000532136 1032 ntBASIC5.28□□□□□ -1.56
RETP07949 YWHABP2-201ENST00000540201 713 ntBASIC5.28□□□□□ -1.56
RETP07949 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.28□□□□□ -1.56
RETP07949 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RETP07949 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
RETP07949 AC084759.1-201ENST00000561168 290 ntBASIC5.28□□□□□ -1.56
RETP07949 AP005403.1-201ENST00000579720 229 ntBASIC5.28□□□□□ -1.56
RETP07949 AP000919.1-201ENST00000582850 985 ntBASIC5.28□□□□□ -1.56
RETP07949 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.28□□□□□ -1.56
RETP07949 AL020997.2-201ENST00000602607 184 ntBASIC5.28□□□□□ -1.56
RETP07949 BNIP3P41-202ENST00000616656 861 ntBASIC5.28□□□□□ -1.56
RETP07949 MIR6758-201ENST00000620653 63 ntBASIC5.28□□□□□ -1.56
RETP07949 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RETP07949 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RETP07949 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RETP07949 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RETP07949 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RETP07949 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.27□□□□□ -1.57
RETP07949 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RETP07949 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RETP07949 RN7SKP95-201ENST00000362860 303 ntBASIC5.27□□□□□ -1.57
RETP07949 RNA5SP505-201ENST00000364748 108 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms