Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NDUFB4P11-201ENST00000560510 395 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.41□□□□□ -1.38
COL5A2P05997 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COL5A2P05997 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A2P05997 AP000756.2-201ENST00000624168 2567 ntBASIC6.4□□□□□ -1.38
COL5A2P05997 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A2P05997 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A2P05997 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A2P05997 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A2P05997 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A2P05997 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL5A2P05997 OR6C69P-201ENST00000394268 893 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.4□□□□□ -1.39
COL5A2P05997 FHP1-201ENST00000442741 703 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 RPL7AP52-201ENST00000458096 790 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.4□□□□□ -1.39
COL5A2P05997 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL5A2P05997 NPM1P6-201ENST00000521088 871 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.4□□□□□ -1.39
COL5A2P05997 OR4A6P-201ENST00000534364 970 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 AC022884.2-201ENST00000578535 580 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.4□□□□□ -1.39
COL5A2P05997 RNF138P2-201ENST00000603490 592 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.4□□□□□ -1.39
COL5A2P05997 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.4□□□□□ -1.39
COL5A2P05997 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL5A2P05997 RAD17P1-201ENST00000418130 2042 ntBASIC6.4□□□□□ -1.39
COL5A2P05997 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL5A2P05997 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
COL5A2P05997 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL5A2P05997 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 MIR134-201ENST00000385258 73 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 ST13P16-201ENST00000401760 781 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 RAD23BP1-201ENST00000421404 1227 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.39□□□□□ -1.39
COL5A2P05997 RN7SL817P-201ENST00000480777 288 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 AP000619.2-201ENST00000546014 969 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.39□□□□□ -1.39
COL5A2P05997 RN7SL290P-201ENST00000578661 300 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 AC012409.3-201ENST00000611343 981 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 AC004232.3-201ENST00000622977 525 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 AC002044.3-201ENST00000623314 541 ntBASIC6.39□□□□□ -1.39
COL5A2P05997 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL5A2P05997 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 AL360270.2-201ENST00000562952 5985 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 AC097063.1-201ENST00000426714 1797 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 AC025574.1-201ENST00000554784 1653 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 AC100871.1-201ENST00000507871 1456 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.38□□□□□ -1.39
COL5A2P05997 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
COL5A2P05997 SAMM50P1-201ENST00000455403 1399 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL5A2P05997 SAMMSON-210ENST00000641260 1308 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 SNORA37-201ENST00000384504 129 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.38□□□□□ -1.39
COL5A2P05997 RPS27AP12-201ENST00000429552 465 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 RPL36AP41-201ENST00000493820 306 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 AC073358.1-201ENST00000505671 684 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 RNU1-6P-201ENST00000516290 144 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.38□□□□□ -1.39
COL5A2P05997 AC084783.1-201ENST00000565846 910 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 VN1R85P-201ENST00000601587 426 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 AC007786.3-201ENST00000615154 596 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 AL161637.1-201ENST00000622380 412 ntBASIC6.38□□□□□ -1.39
COL5A2P05997 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.38□□□□□ -1.39
COL5A2P05997 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A2P05997 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL5A2P05997 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A2P05997 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.37□□□□□ -1.39
COL5A2P05997 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
COL5A2P05997 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A2P05997 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A2P05997 AC125257.1-201ENST00000560400 2930 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A2P05997 Z95114.1-201ENST00000624264 14574 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 OR4K17-201ENST00000315543 1032 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A2P05997 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.37□□□□□ -1.39
COL5A2P05997 YWHAZP2-201ENST00000440317 728 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.37□□□□□ -1.39
COL5A2P05997 AC023271.1-201ENST00000445936 1090 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 AC004980.3-201ENST00000447046 365 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.37□□□□□ -1.39
COL5A2P05997 RPL7P32-201ENST00000457119 744 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 RPL23AP24-201ENST00000458203 385 ntBASIC6.37□□□□□ -1.39
COL5A2P05997 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms