Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC245884.10-201ENST00000597355 337 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC009269.6-201ENST00000621778 588 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AP000943.4-201ENST00000622912 357 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AP006248.3-201ENST00000623580 594 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RAPGEF3O95398 WBP11P1-201ENST00000562560 1931 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RAPGEF3O95398 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 IGKV7-3-201ENST00000357453 298 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 SNORD51.1-201ENST00000365405 77 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 AL589994.1-201ENST00000404962 340 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 ELOCP19-201ENST00000411919 318 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 AF186996.5-201ENST00000418098 904 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 AC078857.1-201ENST00000469870 667 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 AC006427.1-201ENST00000514359 712 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 RN7SKP276-201ENST00000516242 268 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 AL158211.1-201ENST00000566763 763 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 KPNA2P3-201ENST00000584190 848 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 AC093765.1-201ENST00000603758 881 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 AC009027.1-201ENST00000604510 479 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 KATNBL1P5-201ENST00000605015 517 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 AC073342.2-201ENST00000595842 1800 ntBASIC7.75□□□□□ -1.17
RAPGEF3O95398 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.75□□□□□ -1.17
RAPGEF3O95398 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RAPGEF3O95398 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 MTCO1P15-201ENST00000529569 1526 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 CCT8P1-201ENST00000413611 1657 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 SNORA57.1-201ENST00000391227 145 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 AL356057.1-202ENST00000402263 756 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 Z97832.1-201ENST00000402490 328 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 AL121882.1-201ENST00000422893 417 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 BX323845.1-201ENST00000432417 179 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 KRT8P51-201ENST00000438938 274 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 GLUD1P3-202ENST00000508551 200 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 AC110760.3-202ENST00000515177 371 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 HMGB1P23-201ENST00000518743 568 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 NMNAT1P1-201ENST00000554095 876 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 CKS1BP1-201ENST00000555221 240 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 MTATP6P2-201ENST00000603319 678 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 AC020910.3-201ENST00000603701 874 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 AC018690.1-201ENST00000608144 626 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 AP003400.3-201ENST00000624904 346 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 AC022034.1-201ENST00000512867 2156 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms