Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ACA64.4-201ENST00000459070 127 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM38O00635 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
TRIM38O00635 SNORA43.3-201ENST00000517240 103 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRIM38O00635 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM38O00635 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM38O00635 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM38O00635 AC018618.2-201ENST00000604770 446 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
TRIM38O00635 AL035661.1-201ENST00000620459 1144 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 AC083865.1-201ENST00000636634 831 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 BCORP1-203ENST00000513194 5093 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRIM38O00635 AC009962.1-201ENST00000567327 3813 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 RBPJP2-201ENST00000618187 1444 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRIM38O00635 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRIM38O00635 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
TRIM38O00635 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRIM38O00635 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRIM38O00635 RN7SKP162-201ENST00000363605 345 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 HMGB1P13-201ENST00000406019 642 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC010385.1-201ENST00000412374 256 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 LINC01347-201ENST00000417964 355 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 RPS4XP5-201ENST00000419038 768 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 REREP1Y-201ENST00000422655 198 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 RPS27AP6-201ENST00000427962 448 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 CYCSP11-201ENST00000436426 315 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 REREP2Y-201ENST00000439103 200 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 AL163193.1-201ENST00000444895 788 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 RPL34P26-201ENST00000445636 354 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 MTATP6P14-201ENST00000455189 673 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM38O00635 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM38O00635 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM38O00635 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 AC010476.1-201ENST00000519111 851 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM38O00635 AC087894.1-201ENST00000538359 518 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.75□□□□□ -1.49
TRIM38O00635 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 MTND1P24-201ENST00000552175 861 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC126615.2-201ENST00000553003 515 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 MTND3P12-201ENST00000559068 328 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC007346.2-201ENST00000564816 892 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 MIR1273E-201ENST00000581165 102 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC025811.1-201ENST00000604312 472 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM38O00635 AC079395.2-201ENST00000610982 737 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 uc_338.26-201ENST00000612659 160 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC140725.3-201ENST00000616193 880 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM38O00635 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM38O00635 AC005618.4-201ENST00000625053 554 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.75□□□□□ -1.49
TRIM38O00635 TMEM30CP-203ENST00000637814 1035 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 AC068137.4-201ENST00000638485 296 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TRIM38O00635 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TRIM38O00635 NXF4-202ENST00000416098 1465 ntBASIC5.75□□□□□ -1.49
TRIM38O00635 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRIM38O00635 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM38O00635 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM38O00635 AC130304.1-201ENST00000622942 2385 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM38O00635 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms