Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 MIR4675-201ENST00000577898 77 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 H3F3BP2-201ENST00000583907 357 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 DUXAP10-204ENST00000612052 616 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 AL590396.4-201ENST00000636779 956 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXN3O00409 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC016745.2-201ENST00000608834 3443 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXN3O00409 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
FOXN3O00409 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
FOXN3O00409 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 AC079097.1-201ENST00000512187 1399 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.94□□□□□ -1.46
FOXN3O00409 AL121839.2-201ENST00000565058 6943 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AC114786.1-201ENST00000512892 1415 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 AC092681.1-201ENST00000297369 291 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
FOXN3O00409 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.94□□□□□ -1.46
FOXN3O00409 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
FOXN3O00409 AL603865.2-201ENST00000401679 213 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.94□□□□□ -1.46
FOXN3O00409 AC093155.2-201ENST00000420734 937 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.94□□□□□ -1.46
FOXN3O00409 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
FOXN3O00409 NPM1P18-201ENST00000434232 732 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 SUMO2P3-201ENST00000438311 288 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AC073465.2-201ENST00000440938 498 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 PCNPP2-201ENST00000441651 455 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 IGBP1P3-201ENST00000447449 1000 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 RPL7P61-201ENST00000451721 751 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AC002553.2-201ENST00000453217 340 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 RPS27AP16-201ENST00000492222 470 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 AC091912.1-201ENST00000511351 248 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 RPS27AP18-201ENST00000515536 459 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 AC122134.1-201ENST00000565664 1104 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.94□□□□□ -1.46
FOXN3O00409 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.94□□□□□ -1.46
FOXN3O00409 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.94□□□□□ -1.46
FOXN3O00409 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.94□□□□□ -1.46
FOXN3O00409 AC100767.2-201ENST00000604840 693 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 RNA5SP439-201ENST00000617595 124 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AC021106.3-201ENST00000623925 531 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
FOXN3O00409 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 NXF4-202ENST00000416098 1465 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 AL627171.1-201ENST00000618845 1308 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 AC109446.4-201ENST00000623235 2755 ntBASIC5.94□□□□□ -1.46
FOXN3O00409 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.94□□□□□ -1.46
FOXN3O00409 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
FOXN3O00409 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
FOXN3O00409 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
FOXN3O00409 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
FOXN3O00409 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
FOXN3O00409 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
FOXN3O00409 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.93□□□□□ -1.46
FOXN3O00409 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
FOXN3O00409 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
FOXN3O00409 NLRP3P1-201ENST00000622303 1785 ntBASIC5.93□□□□□ -1.46
FOXN3O00409 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
FOXN3O00409 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
FOXN3O00409 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
FOXN3O00409 YES1P1-201ENST00000418510 1628 ntBASIC5.93□□□□□ -1.46
FOXN3O00409 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.93□□□□□ -1.46
FOXN3O00409 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
FOXN3O00409 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
FOXN3O00409 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms