Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC244107.2-201ENST00000611773 76 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 AP004607.9-201ENST00000618202 316 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 AC097460.3-201ENST00000623099 442 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 AP006248.3-201ENST00000623580 594 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 AC132068.1-201ENST00000623805 459 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SRRM4A7MD48 CU639417.4-201ENST00000623928 207 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 OR8A1-204ENST00000642111 1145 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SRRM4A7MD48 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SRRM4A7MD48 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.36□□□□□ -1.71
SRRM4A7MD48 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 TCP11X1-202ENST00000622971 1372 ntBASIC4.36□□□□□ -1.71
SRRM4A7MD48 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.36□□□□□ -1.71
SRRM4A7MD48 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.36□□□□□ -1.71
SRRM4A7MD48 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SRRM4A7MD48 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SRRM4A7MD48 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL445437.1-201ENST00000623157 3087 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 RNU1-146P-201ENST00000364015 165 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 RNA5SP241-201ENST00000391326 114 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 DBIP1-201ENST00000401435 260 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 OR2AT2P-201ENST00000413438 905 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 XKRYP4-201ENST00000414395 483 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AKR1B10P1-201ENST00000425765 942 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 MTCO3P21-201ENST00000430791 643 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC016772.1-201ENST00000444170 1261 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 RPL36AP39-201ENST00000445859 318 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 XKRYP5-201ENST00000449659 483 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL354710.1-201ENST00000453641 246 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC084754.1-201ENST00000463466 464 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC094085.1-201ENST00000468914 584 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC007998.1-201ENST00000474156 672 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 MTND6P2-201ENST00000512226 524 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 NRBF2P4-201ENST00000520874 850 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 RN7SL290P-201ENST00000578661 300 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 VN1R84P-201ENST00000593697 235 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AL136370.1-201ENST00000608166 691 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC010435.1-201ENST00000623353 1177 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AC007683.2-201ENST00000624681 714 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 MIR1910-201ENST00000636955 80 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 STX3-208ENST00000641815 3236 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 MAPK10-338ENST00000641647 3362 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
SRRM4A7MD48 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRRM4A7MD48 BX005019.1-201ENST00000561881 1810 ntBASIC4.35□□□□□ -1.71
SRRM4A7MD48 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.34□□□□□ -1.71
SRRM4A7MD48 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.34□□□□□ -1.71
SRRM4A7MD48 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SRRM4A7MD48 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SRRM4A7MD48 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.34□□□□□ -1.71
SRRM4A7MD48 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
SRRM4A7MD48 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SRRM4A7MD48 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms