Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RN7SKP271-201ENST00000410528 320 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 RN7SKP161-201ENST00000411110 305 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 MGAT2P2-201ENST00000427194 797 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AL513175.1-201ENST00000431492 780 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC092809.1-201ENST00000441469 474 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 COX6CP18-201ENST00000448769 222 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 RN7SKP31-201ENST00000516354 278 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 IGHV4-55-201ENST00000520889 368 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AP003392.2-201ENST00000527269 208 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AL512347.1-201ENST00000566420 503 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC090751.1-201ENST00000566966 267 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AP001823.1-201ENST00000604056 1003 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 NDUFA8P1-201ENST00000605525 367 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC025588.4-201ENST00000615802 908 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC018692.2-201ENST00000624130 348 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 RNU1-134P-201ENST00000362935 165 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 RNA5SP346-201ENST00000363541 121 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 RNU2-22P-201ENST00000411266 212 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC022022.1-201ENST00000430304 178 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 ANKRD54P1-201ENST00000433115 471 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 USP9YP29-201ENST00000445112 563 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC005077.1-201ENST00000449226 375 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 RN7SL826P-201ENST00000479724 288 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC079841.1-201ENST00000481228 950 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 RNA5SP434-201ENST00000516647 121 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC013283.1-201ENST00000557282 492 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AP005262.1-201ENST00000582646 997 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC083899.3-201ENST00000603413 594 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 SAMMSON-209ENST00000641222 1100 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC241584.2-201ENST00000637142 2090 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 AC023245.2-201ENST00000530760 2978 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 RNF6P1-201ENST00000444889 1784 ntBASIC7.54□□□□□ -1.2
TMEM88BA6NKF7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms