Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC137768.1-201ENST00000549998 553 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 MIR4270-201ENST00000581799 70 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 AL512782.1-201ENST00000603093 364 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 MIR6748-201ENST00000610433 71 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 MIR6820-201ENST00000611508 62 ntBASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMIM28A0A1B0GU29 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 RPA2P2-201ENST00000419698 796 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 RPL36AP15-201ENST00000444514 266 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC063949.1-201ENST00000552900 865 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL161616.1-201ENST00000611867 286 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL031658.2-201ENST00000616850 651 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AL022401.1-201ENST00000619498 108 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC008758.3-201ENST00000507003 1829 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 AC068446.1-201ENST00000556425 1549 ntBASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SMIM28A0A1B0GU29 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 RN7SKP115-201ENST00000363177 317 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AC114755.2-201ENST00000413520 361 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 RPL26P29-201ENST00000415623 438 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AL590139.1-201ENST00000416267 400 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 OR2B7P-201ENST00000429302 934 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 NRBF2P3-201ENST00000432731 865 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 RNA5SP228-201ENST00000516232 133 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 RN7SKP276-201ENST00000516242 268 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 BNIP3P1-201ENST00000547295 580 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AL049839.1-201ENST00000556151 657 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AC027216.1-201ENST00000577726 685 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 AP000919.1-201ENST00000582850 985 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 NCLP2-201ENST00000416078 1462 ntBASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMIM28A0A1B0GU29 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms