Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 AP001642.1-201ENST00000624727 2117 ntBASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 ZNF733P-202ENST00000444809 1573 ntBASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 HSPA8P14-201ENST00000552265 1805 ntBASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRAV27A0A087WT01 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 RPL23P2-201ENST00000320371 421 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 RNU6-171P-201ENST00000384354 107 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 MIR223-201ENST00000385204 110 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AP000534.2-201ENST00000412729 568 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 EIF4A1P1-201ENST00000420241 934 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 RPL12P11-201ENST00000439970 501 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC090114.3-201ENST00000479267 829 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC116562.1-201ENST00000485355 781 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC073358.1-201ENST00000505671 684 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 RNU6-513P-201ENST00000516104 104 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 Y_RNA.719-201ENST00000517156 106 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC092490.3-201ENST00000545370 572 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AL049839.1-201ENST00000556151 657 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC093591.2-201ENST00000565254 3843 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 TVP23CP2-201ENST00000571473 623 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 SNORA74C-1-201ENST00000580726 201 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 TAS2R6P-201ENST00000605022 826 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC022106.2-201ENST00000620114 757 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC015804.1-201ENST00000622935 435 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC243960.7-201ENST00000623532 707 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC004808.2-201ENST00000627965 773 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC099654.11-201ENST00000638857 294 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 THAP12P4-201ENST00000528321 2266 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 AL603750.1-201ENST00000624216 1717 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 ZNF652P1-201ENST00000442420 1309 ntBASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAV27A0A087WT01 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AC010266.2-201ENST00000564741 3255 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 RNA5SP428-201ENST00000365129 132 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AL021331.1-201ENST00000402817 582 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 U3.35-201ENST00000408405 208 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 CNOT7P2-201ENST00000441051 832 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AC112206.1-201ENST00000468416 477 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 BX284632.1-201ENST00000478218 541 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 RN7SL319P-201ENST00000480656 221 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 RN7SL97P-201ENST00000486780 299 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 RN7SL30P-201ENST00000488416 306 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 RNU6-709P-201ENST00000517257 104 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 MIR1269B-201ENST00000580405 75 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 MEMO1P5-201ENST00000604810 406 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AL356752.1-201ENST00000615844 593 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 AC133552.1-201ENST00000569988 4007 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms