Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 AL353600.1-201ENST00000608148 251 ntBASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 OR7M1P-201ENST00000608946 533 ntBASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 AP005131.7-201ENST00000610087 611 ntBASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DRB4X5D2U9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 MIR1286-201ENST00000408112 78 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AL358176.3-201ENST00000420757 454 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC009238.2-201ENST00000431026 355 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 TMX2P1-201ENST00000436507 708 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AL450263.2-201ENST00000439400 589 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 PPIAP20-201ENST00000449839 135 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC097173.1-201ENST00000505862 819 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AL512329.2-201ENST00000607350 548 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AP000864.1-201ENST00000609424 650 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC006840.1-201ENST00000623069 542 ntBASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DRB4X5D2U9 AC126323.6-202ENST00000568092 3511 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC011493.1-201ENST00000596753 1632 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 MIPEPP2-201ENST00000422560 1819 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 SNORA17.1-201ENST00000362945 126 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL391361.1-201ENST00000405580 489 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL390316.1-201ENST00000406279 553 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AP000534.2-201ENST00000412729 568 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 CYCSP10-201ENST00000417973 294 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 RPS4XP16-201ENST00000427198 791 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC073587.1-201ENST00000447093 876 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL645937.3-201ENST00000453647 936 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms