Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 HNRNPCP1-201ENST00000556181 766 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 VN1R83P-201ENST00000595685 445 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC068768.2-201ENST00000602352 343 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC100767.2-201ENST00000604840 693 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC024257.5-201ENST00000612739 531 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 MIR6729-201ENST00000618194 65 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AL512652.1-201ENST00000619006 500 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 MIR7159-201ENST00000620587 66 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC092608.3-201ENST00000625017 386 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC092724.1-201ENST00000624623 3397 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AC104446.1-201ENST00000613728 1321 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 AL606537.1-201ENST00000607258 2011 ntBASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHGA6Q9Y5G7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AL442128.2-201ENST00000620246 1824 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC092692.1-201ENST00000623625 2595 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 NACA3P-201ENST00000359690 648 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 ELOCP9-201ENST00000418624 239 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 MFSD13B-201ENST00000420133 1290 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AL590399.4-201ENST00000436561 601 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 DNAJC19P5-201ENST00000443295 316 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SETD6P1-201ENST00000444575 317 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC092967.1-201ENST00000449016 481 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 DNAJC19P8-201ENST00000452887 259 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 NXT1P1-201ENST00000458481 316 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 RPL23AP12-201ENST00000467573 473 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC073522.1-201ENST00000483312 377 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC104109.1-201ENST00000498563 436 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC118282.2-201ENST00000508739 374 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SNORA81.2-201ENST00000516868 170 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 TMEM97P2-201ENST00000517841 403 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 ZNF321P-202ENST00000550843 495 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 RPA2P1-201ENST00000556557 721 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 MIR5708-201ENST00000579723 85 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 MIR4420-201ENST00000583944 77 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC015688.2-201ENST00000584523 262 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC090236.2-201ENST00000587933 1101 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC008521.2-201ENST00000591021 259 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 AC068790.7-201ENST00000602347 528 ntBASIC5.88□□□□□ -1.47
PCDHGA6Q9Y5G7 MRPS35P3-201ENST00000603189 709 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms