Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 OR1S1-201ENST00000624470 978 ntBASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 AL356473.1-201ENST00000406203 1408 ntBASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB4Q9Y5E5 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 Y_RNA.77-201ENST00000362962 107 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 GNG5P2-201ENST00000372054 207 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 RPS3AP26-201ENST00000398259 784 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 RNU4-74P-201ENST00000411280 161 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 MTCO1P21-201ENST00000416634 589 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 TNPO1P1-201ENST00000423641 1138 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC234781.2-201ENST00000426370 994 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC099677.3-201ENST00000427081 395 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 MTCYBP42-201ENST00000444653 1130 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC233982.1-201ENST00000451247 436 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC023194.2-201ENST00000465398 406 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC092865.4-201ENST00000477936 615 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC105233.3-201ENST00000531125 744 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC006512.2-201ENST00000543250 486 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC244502.2-201ENST00000543361 851 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 DPPA3P2-202ENST00000557188 1219 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 HMGN2P47-201ENST00000559378 272 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC026826.3-201ENST00000561747 158 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AGGF1P7-201ENST00000562369 913 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 MTCO2P22-201ENST00000603246 681 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC004987.4-201ENST00000603383 338 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AP001437.1-201ENST00000608783 456 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC009163.6-201ENST00000612367 342 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 MIR7109-201ENST00000613748 65 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AL162574.1-201ENST00000615702 950 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AL121890.3-201ENST00000618494 516 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AL136228.1-201ENST00000622221 319 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 Z69908.1-201ENST00000622603 247 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AL157770.1-201ENST00000623049 439 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 NEPNP-201ENST00000404786 1371 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 Z83820.1-201ENST00000456978 1499 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AC012254.3-201ENST00000591183 2117 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 IMMTP1-201ENST00000435590 2219 ntBASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB4Q9Y5E5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 CDY11P-201ENST00000447168 1651 ntBASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 LYARP1-201ENST00000436977 1501 ntBASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 RNA5SP211-201ENST00000365516 117 ntBASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 SNORA70.9-201ENST00000384370 135 ntBASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 ERHP2-201ENST00000402323 299 ntBASIC6.37□□□□□ -1.39
PCDHB4Q9Y5E5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 365 ms