Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.46-201ENST00000362695 102 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.152-201ENST00000363578 100 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RNY1P12-201ENST00000364251 105 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RNU1-11P-201ENST00000383975 164 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-452P-201ENST00000384406 107 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AL590143.1-201ENST00000405071 138 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.646-201ENST00000410980 101 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC073264.1-201ENST00000411508 416 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AL590135.1-201ENST00000422215 156 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RSL24D1P6-201ENST00000426934 401 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RPL3P8-201ENST00000432928 1191 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 SLC25A18P1-201ENST00000449385 454 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC023194.2-201ENST00000465398 406 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC126389.1-201ENST00000477436 290 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC002456.2-201ENST00000509356 380 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.700-201ENST00000516806 100 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 GNAI2P1-201ENST00000541815 315 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC093519.1-201ENST00000566109 298 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC245052.7-201ENST00000601161 359 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 pRNA.12-201ENST00000614353 90 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 pRNA.3-201ENST00000615048 90 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC091953.5-201ENST00000622919 233 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 MIR193BHG-210ENST00000641327 515 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.9□□□□□ -1.15
VPS9D1Q9Y2B5 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 Z83820.1-201ENST00000456978 1499 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 Y_RNA.150-201ENST00000363562 102 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 Y_RNA.493-201ENST00000384422 102 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-606P-201ENST00000384721 111 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-713P-201ENST00000384761 107 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-101P-201ENST00000410323 104 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RN7SKP261-201ENST00000410948 278 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AL139396.1-201ENST00000421137 167 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC093107.1-201ENST00000422772 609 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AL122003.1-201ENST00000435206 784 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 YWHAZP8-201ENST00000436935 731 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 OR1H1P-201ENST00000448731 937 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RBMY2EP-202ENST00000456360 940 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 NF1P3-201ENST00000457709 450 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RNU7-66P-201ENST00000459469 62 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC116353.1-201ENST00000489727 316 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 Vault.2-201ENST00000516519 98 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RN7SKP2-201ENST00000517003 319 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC012400.1-201ENST00000518452 381 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 RBMS2P1-201ENST00000525031 1226 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms