Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.65□□□□□ -1.02
PDZRN3Q9UPQ7 HSPD1P11-201ENST00000508643 1702 ntBASIC8.65□□□□□ -1.03
PDZRN3Q9UPQ7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
PDZRN3Q9UPQ7 UGT2B27P-201ENST00000505092 1620 ntBASIC8.65□□□□□ -1.03
PDZRN3Q9UPQ7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
PDZRN3Q9UPQ7 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.03
PDZRN3Q9UPQ7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AP001157.1-201ENST00000550837 2339 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01613-201ENST00000561476 2780 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 OR5P1P-201ENST00000299512 925 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.279-201ENST00000364763 95 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 UBBP1-201ENST00000392399 473 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL139805.1-201ENST00000407837 289 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL645939.3-201ENST00000435408 225 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 TCEA1P3-201ENST00000443005 880 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 RNA5SP269-201ENST00000459032 137 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC018710.1-201ENST00000506509 158 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 RNU6-406P-201ENST00000516470 107 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL359212.1-201ENST00000556608 614 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL133457.1-201ENST00000564251 987 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL163952.1-202ENST00000569625 600 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 HMGB1P24-202ENST00000615653 685 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 MIR6071-201ENST00000616741 78 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL607023.1-201ENST00000620045 248 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL445264.1-201ENST00000621719 171 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL450226.2-201ENST00000622913 439 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AL078596.1-201ENST00000624856 447 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC129502.1-201ENST00000623261 1654 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 SALL4P7-201ENST00000555779 3120 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 AC016251.2-201ENST00000623393 3089 ntBASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
PDZRN3Q9UPQ7 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AL355852.1-201ENST00000454081 1771 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 NEK2P4-201ENST00000425793 1329 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AL512310.3-201ENST00000547023 1335 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 OR10J6P-201ENST00000289731 930 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.145-201ENST00000363527 102 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 RNA5SP122-201ENST00000384457 108 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 RNU6-757P-201ENST00000410334 100 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC068533.2-201ENST00000411872 306 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 OR2AF1P-201ENST00000454899 889 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC083806.1-201ENST00000468934 316 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC018797.1-201ENST00000510791 255 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 SNORA74.1-201ENST00000516320 180 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 TRMT10BP1-201ENST00000519377 943 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC006530.1-201ENST00000555980 571 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 MIR4528-201ENST00000577763 90 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 MTCYBP13-201ENST00000578634 1093 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC135068.5-201ENST00000624197 983 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms