Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RN7SL366P-201ENST00000577957 292 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 ARGFXP2-201ENST00000579304 949 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RN7SL178P-201ENST00000582930 304 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RPL12P25-202ENST00000598100 674 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC019193.3-201ENST00000609144 554 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 U1.31-201ENST00000620022 160 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC015908.5-201ENST00000623289 343 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC022743.1-201ENST00000624990 664 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AP000766.1-201ENST00000561746 4140 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 FOLH1B-202ENST00000529567 2145 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 HSPA8P11-201ENST00000508840 1898 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 SEC63P2-201ENST00000503863 1939 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 CYP1D1P-201ENST00000416662 1433 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 GTF2H2B-203ENST00000508065 1432 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC006511.3-201ENST00000624929 1783 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 SAMMSON-203ENST00000641005 2168 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 CASC19-284ENST00000642142 1868 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 SNORA33.2-201ENST00000365413 134 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC113608.1-201ENST00000398740 305 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AL603766.1-201ENST00000407763 664 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 RNU2-18P-201ENST00000411224 162 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 ANKRD54P1-201ENST00000433115 471 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 FTH1P16-201ENST00000435241 552 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 RPL31P44-201ENST00000447680 377 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AL583843.1-201ENST00000456070 346 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 RPL38P1-201ENST00000460914 211 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 RPL7P19-201ENST00000469948 618 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC074386.1-201ENST00000476560 767 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 IGKV2-29-201ENST00000521304 372 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 BRD9P1-201ENST00000529855 560 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 ELOCP31-201ENST00000540463 467 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 COX6CP11-201ENST00000555293 229 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 PRR13P5-201ENST00000596581 442 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC108451.2-201ENST00000603875 538 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC243830.2-201ENST00000618067 630 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC243756.2-201ENST00000618406 463 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms