Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NDUFA5P12-201ENST00000503796 343 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 Y_RNA.719-201ENST00000517156 106 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 MORF4L1P3-201ENST00000525966 950 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 HNRNPRP2-201ENST00000528421 743 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 AC005000.1-201ENST00000536192 288 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 AC020910.3-201ENST00000603701 874 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 AC011453.2-201ENST00000603737 729 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CISHQ9NSE2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CISHQ9NSE2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CISHQ9NSE2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 AL078595.2-201ENST00000605309 1780 ntBASIC5.21□□□□□ -1.57
CISHQ9NSE2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CISHQ9NSE2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.21□□□□□ -1.57
CISHQ9NSE2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CISHQ9NSE2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 OR5M12P-201ENST00000423388 929 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 AL157385.1-201ENST00000446973 268 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 GYG1P1-201ENST00000460864 698 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 GAPDHP56-201ENST00000506031 988 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 AP000676.2-201ENST00000529711 301 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 AC021006.3-201ENST00000530771 192 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 AL049839.1-201ENST00000556151 657 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 AC051619.2-201ENST00000559063 397 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 AL583832.1-201ENST00000603227 784 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CISHQ9NSE2 AC087385.3-201ENST00000620477 187 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 CASC19-222ENST00000641321 1173 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CISHQ9NSE2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CISHQ9NSE2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CISHQ9NSE2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CISHQ9NSE2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CISHQ9NSE2 ZNF652P1-201ENST00000442420 1309 ntBASIC5.21□□□□□ -1.58
CISHQ9NSE2 AC131971.1-201ENST00000332881 1482 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC112255.1-201ENST00000624070 2493 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 SNORA74A-201ENST00000364089 198 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 COX6B1P1-201ENST00000415962 213 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC007394.1-201ENST00000421941 531 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 VN1R54P-201ENST00000435210 1049 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 SLC25A18P1-201ENST00000449385 454 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 RPL7P61-201ENST00000451721 751 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 CR383656.1-201ENST00000484916 377 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 AP006245.2-201ENST00000522004 300 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 OR1F2P-201ENST00000570470 933 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 SNORA74C-1-201ENST00000580726 201 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AP000919.1-201ENST00000582850 985 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC007497.1-201ENST00000610421 561 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 CR381572.2-201ENST00000624852 397 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 AL031595.2-201ENST00000624215 19071 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC083837.1-201ENST00000565297 2994 ntBASIC5.2□□□□□ -1.58
CISHQ9NSE2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CISHQ9NSE2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CISHQ9NSE2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CISHQ9NSE2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CISHQ9NSE2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CISHQ9NSE2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CISHQ9NSE2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms