Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 BX284613.1-201ENST00000452221 1641 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC099786.3-201ENST00000565735 1410 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 RNU1-19P-201ENST00000363306 165 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 U6.112-201ENST00000384129 70 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 SPTLC1P2-201ENST00000407089 121 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC092648.1-201ENST00000425870 423 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC092634.2-201ENST00000428146 1010 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 RPL5P2-201ENST00000429598 854 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AL591719.1-201ENST00000444669 744 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC099063.2-201ENST00000446360 662 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC092155.2-201ENST00000454675 477 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 HSPE1P22-201ENST00000456856 327 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC006539.1-201ENST00000481419 501 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 RN7SL30P-201ENST00000488416 306 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 RPL17P2-201ENST00000491913 451 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC006499.3-201ENST00000506077 748 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC079064.1-201ENST00000528365 362 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 DUXAP5-201ENST00000529668 529 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AL121594.2-201ENST00000541658 472 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 HSPE1P2-201ENST00000554777 306 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 AL109741.3-201ENST00000561748 592 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 PART1_2.1-201ENST00000612397 250 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AC018628.1-201ENST00000624147 3819 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTA1Q9NP79 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VTA1Q9NP79 ZNF733P-202ENST00000444809 1573 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 AP004607.3-201ENST00000530354 3915 ntBASIC6.43□□□□□ -1.38
VTA1Q9NP79 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 AL592429.1-201ENST00000403909 1473 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 SNORA58B-201ENST00000364259 136 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 RNU4-28P-201ENST00000364739 141 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 RNU4-2-201ENST00000365668 141 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 DPPA2P3-201ENST00000411853 655 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 OR10R1P-201ENST00000441524 1141 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC019185.1-201ENST00000442718 389 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 Z77249.1-201ENST00000444622 1175 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 RPS23P2-201ENST00000463671 415 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 RN7SL727P-201ENST00000482164 296 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC090638.1-201ENST00000498296 909 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 MIR4789-201ENST00000577469 82 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC113368.1-201ENST00000603736 382 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC012557.1-201ENST00000607115 611 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC132068.1-201ENST00000623805 459 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 SAMMSON-227ENST00000642114 1199 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms