Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RPAP1Q9BWH6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RPAP1Q9BWH6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RPAP1Q9BWH6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 RNA5SP428-201ENST00000365129 132 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AP002530.1-201ENST00000405705 684 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AC016397.1-201ENST00000412463 242 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 CHEK2P3-201ENST00000416118 248 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AL513533.1-201ENST00000453728 415 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 snoU13.20-201ENST00000459180 104 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AC006363.1-201ENST00000603806 463 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 BNIP3P35-201ENST00000604530 490 ntBASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
RPAP1Q9BWH6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 RN7SKP113-201ENST00000363891 295 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 RPS4XP9-201ENST00000405151 780 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 CTSL3P-202ENST00000412179 788 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 NPM1P25-201ENST00000429734 854 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 BX323845.1-201ENST00000432417 179 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AC011753.3-201ENST00000443436 406 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 RPS29P33-201ENST00000456717 146 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AC140172.1-201ENST00000502928 141 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AP001157.1-201ENST00000550837 2339 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AC005261.2-201ENST00000593427 4258 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 AL450345.1-202ENST00000605741 3881 ntBASIC6.14□□□□□ -1.43
RPAP1Q9BWH6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AL603750.1-201ENST00000624216 1717 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC133552.1-201ENST00000569988 4007 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AL731532.2-201ENST00000623542 1953 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC010132.2-201ENST00000295493 1043 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 RN7SKP114-201ENST00000410327 279 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 EIF2S2P3-201ENST00000428356 999 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC008072.1-201ENST00000434254 824 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC012512.1-201ENST00000446594 718 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC020779.1-201ENST00000478757 796 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 RNA5SP43-201ENST00000516559 110 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 BNIP3P1-201ENST00000547295 580 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 BGLT3-201ENST00000564523 994 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 MIR4697-201ENST00000582977 78 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 AC132825.1-201ENST00000463573 2247 ntBASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPAP1Q9BWH6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms