Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC105074.1-201ENST00000623380 3095 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC009148.1-201ENST00000570148 2693 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 MIR369-201ENST00000362155 70 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 Y_RNA.445-201ENST00000384168 102 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AL353151.1-201ENST00000402406 604 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 RN7SKP148-201ENST00000410179 275 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AL645937.1-202ENST00000421799 937 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 CYP4F34P-201ENST00000425951 481 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 Z82205.1-201ENST00000428456 297 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC098828.1-201ENST00000436164 440 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 RPS10P18-201ENST00000442662 495 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC012512.1-201ENST00000446594 718 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 HMGB1P7-201ENST00000450921 612 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 RN7SL149P-201ENST00000465197 281 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC027575.1-201ENST00000481064 460 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 RNU4-49P-201ENST00000516080 140 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AF279873.1-201ENST00000523393 313 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC009779.4-201ENST00000554248 611 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC090312.1-201ENST00000580637 348 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC024267.2-201ENST00000582737 417 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AP001330.4-201ENST00000604350 154 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AL512504.2-201ENST00000445455 1909 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 AC107398.3-201ENST00000562284 7000 ntBASIC7.83□□□□□ -1.16
PHOX2BQ99453 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.83□□□□□ -1.16
PHOX2BQ99453 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PHOX2BQ99453 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 RNU5E-1-201ENST00000362477 120 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 Y_RNA.100-201ENST00000363141 102 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 RN7SKP251-201ENST00000410830 314 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC007394.1-201ENST00000421941 531 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC119618.1-201ENST00000434191 222 ntBASIC7.82□□□□□ -1.16
PHOX2BQ99453 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.82□□□□□ -1.16
PHOX2BQ99453 AC079781.2-201ENST00000446424 169 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms