Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 SNORD46.2-201ENST00000516021 102 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 MTND2P26-201ENST00000528255 1029 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC109635.3-201ENST00000529536 185 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 OR7E128P-201ENST00000532736 1024 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 HNRNPCP1-201ENST00000556181 766 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC092868.3-201ENST00000560515 784 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC007346.2-201ENST00000564816 892 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 GARSP1-201ENST00000570895 719 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC010245.2-201ENST00000606908 1167 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL135786.2-201ENST00000608422 615 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC084036.1-201ENST00000609190 508 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 VIS1.1-201ENST00000610517 203 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC025588.4-201ENST00000615802 908 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL356752.1-201ENST00000615844 593 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC073968.1-201ENST00000618594 637 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 VN1R7P-201ENST00000619242 903 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC073530.2-201ENST00000623987 261 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL356596.1-201ENST00000624230 379 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL390318.1-201ENST00000624564 687 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AP003072.4-201ENST00000624580 310 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL160394.1-201ENST00000624765 724 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 CASC19-248ENST00000641674 1356 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AC073544.1-201ENST00000600110 1595 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 HSPD1P8-201ENST00000400121 1658 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL731532.1-201ENST00000623972 4236 ntBASIC6.14□□□□□ -1.43
CDK5RAP1Q96SZ6 AL442128.2-201ENST00000620246 1824 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC130304.1-201ENST00000622942 2385 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL355379.1-201ENST00000405542 640 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 SDHDP6-201ENST00000414693 480 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL008987.1-201ENST00000415528 237 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 ARL2BPP3-201ENST00000421226 480 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC011233.1-201ENST00000422812 283 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 C8orf59P1-201ENST00000429930 303 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 PTP4A1P3-201ENST00000433661 420 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 FABP5P3-201ENST00000437960 408 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC023141.8-201ENST00000442554 208 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC073109.1-201ENST00000445066 978 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL360221.1-201ENST00000445989 335 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 RPL31P15-201ENST00000449770 338 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC104689.1-201ENST00000473356 768 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 RPS17P15-201ENST00000475609 349 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 CR383656.1-201ENST00000484916 377 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC080014.1-201ENST00000496877 1201 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 NENFP3-201ENST00000503735 313 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC105420.1-201ENST00000504389 582 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC093752.1-206ENST00000511823 336 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 NPM1P21-201ENST00000513394 762 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 RN7SKP288-201ENST00000516227 268 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AP001804.1-201ENST00000526868 919 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC007115.1-201ENST00000546853 234 ntBASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK5RAP1Q96SZ6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms